RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LMNB2Q03252 620 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 HIF1AQ16665 826 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 TAF1BQ53T94 588 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CENPUQ71F23 418 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 FAM13CQ8NE31 585 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 RFWD2Q8NHY2 731 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CPT1BQ92523 772 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 PRR11Q96HE9 360 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 SLC5A4Q9NY91 659 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 DONSONQ9NYP3 566 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 PCSK1NQ9UHG2 260 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CYTH4Q9UIA0 394 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ADAMTS5Q9UNA0 930 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CST8O60676 142 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 DKC1O60832 514 aaKnown RBP eCLIP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 TMEM63AO94886 807 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 CNTN2Q02246 1040 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 CAPSQ13938 189 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 MTDHQ86UE4 582 aaKnown RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 LONP2Q86WA8 852 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 UNC45BQ8IWX7 931 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 CDHR1Q96JP9 859 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 TTC25Q96NG3 672 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 TXLNGQ9NUQ3 528 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 PSMC3IPQ9P2W1 217 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 AFG3L2Q9Y4W6 797 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 SIP14410 1827 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 A0A1B0GUA9 196 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 C2orf71A6NGG8 1288 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 C3orf70A6NLC5 250 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 OATP04181 439 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 TBXAS1P24557 533 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 NOL9Q5SY16 702 aaKnown RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 TDRPQ86YL5 185 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 UBR7Q8N806 425 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 FBXO36Q8NEA4 188 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 SLC35B2Q8TB61 432 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 TCP10LQ8TDR4 215 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 PYROXD1Q8WU10 500 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 LRMDAQ9H2I8 198 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 DHX33Q9H6R0 707 aaKnown RBP12.94□□□□□ -0.34
VPS33B-201ENST00000333371 KANSL3Q9P2N6 904 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 POLIQ9UNA4 740 aa12.94□□□□□ -0.34
VPS33B-201ENST00000333371 PEX11AO75192 247 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 ENTPD5O75356 428 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 PSMA2P25787 234 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 RPL22P35268 128 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 ARL2P36404 184 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 PTPN20Q4JDL3 420 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 RAB6CQ53S08 254 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 DRICH1Q6PGQ1 229 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 NLRP9Q7RTR0 991 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 LRRN4Q8WUT4 740 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 IMPG2Q9BZV3 1241 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 RAB6CQ9H0N0 254 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 PCDH9Q9HC56 1237 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 NXF1Q9UBU9 619 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 DICER1Q9UPY3 1922 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 PIK3R2O00459 728 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 ATP2A1O14983 1001 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 LRCH4O75427 683 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 CD19P15391 556 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 SKIV2L2P42285 1042 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 CDH8P55286 799 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 EFHC2Q5JST6 749 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 CEP120Q8N960 986 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 SLC7A3Q8WY07 619 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 NKD2Q969F2 451 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 ZBTB10Q96DT7 871 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 SMG5Q9UPR3 1016 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 DRG1Q9Y295 367 aaKnown RBP12.93□□□□□ -0.34
VPS33B-201ENST00000333371 SSC5DA1L4H1 1573 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 TRIP11Q15643 1979 aa12.93□□□□□ -0.34
VPS33B-201ENST00000333371 EVPLQ92817 2033 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms