RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 KCNA4P22459 653 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANXA13P27216 316 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 HOXA7P31268 230 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MSX2P35548 267 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TCF7P36402 384 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PGM5Q15124 567 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 IFNEQ86WN2 208 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NACA2Q9H009 215 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RANBP17Q9H2T7 1088 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ELP3Q9H9T3 547 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 WHRNQ9P202 907 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 COL20A1Q9P218 1284 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RIPK3Q9Y572 518 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CHD2O14647 1828 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KIF1AQ12756 1690 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TPST1O60507 370 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FAM155BO75949 473 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 VTNP04004 478 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CXCL9Q07325 125 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NR1H3Q13133 447 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TMED1Q13445 227 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PAN2Q504Q3 1202 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TFDP3Q5H9I0 405 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 EFCAB12Q6NXP0 572 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DLK2Q6UY11 383 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CD302Q8IX05 232 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ABRAQ8N0Z2 381 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MAGEB18Q96M61 343 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TMEM120AQ9BXJ8 343 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SMG5Q9UPR3 1016 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 C15orf41Q9Y2V0 281 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FAM237BA0A1B0GVD1 139 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KBTBD13C9JR72 458 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 WDR46O15213 610 aaKnown RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 VIL1P09327 827 aaKnown RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MOXD1Q6UVY6 613 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DENND5BQ6ZUT9 1274 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SCUBE3Q8IX30 993 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 BSNDQ8WZ55 320 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GRAMD1AQ96CP6 724 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NIF3L1Q9GZT8 377 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 IL1RL2Q9HB29 575 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 V9GYQ6 96 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MYH7P12883 1935 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 LCA5LO95447 670 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 F7P08709 466 aaPredicted RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TCF4P15884 667 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PRAMEP78395 509 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 OCRLQ01968 901 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CCNG2Q16589 344 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KBTBD12Q3ZCT8 623 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GLIS1Q8NBF1 620 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZNF75CPQ92670 426 aaPredicted RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NSL1Q96IY1 281 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TBC1D10AQ9BXI6 508 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RXFP1Q9HBX9 757 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MYOZ2Q9NPC6 264 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 HOXC10Q9NYD6 342 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SLC17A7Q9P2U7 560 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 STRIP2Q9ULQ0 834 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZNRF3Q9ULT6 936 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ATP5HO75947 161 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 AVPR1AP37288 418 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NCALDP61601 193 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ITIH4Q14624 930 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KPNB1Q14974 876 aaKnown RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DCAF6Q58WW2 860 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DALRD3Q5D0E6 543 aaKnown RBP10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TRIM72Q6ZMU5 477 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANO5Q75V66 913 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FAM71AQ8IYT1 594 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RTKN2Q8IZC4 609 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ADAM32Q8TC27 787 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TEKT4Q8WW24 435 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 LRGUKQ96M69 825 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PTPRHQ9HD43 1115 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PXMP2Q9NR77 195 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SLC12A6Q9UHW9 1150 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANGPTL2Q9UKU9 493 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RGPD5Q99666 1765 aa10.25□□□□□ -0.77
CSGALNACT1-201ENST00000332246 E9PBE3 544 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 APOL1O14791 398 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ASAP2O43150 1006 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 BNIP3LO60238 219 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ADCY3O60266 1144 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KLHL41O60662 606 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DSG3P32926 999 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GARSP41250 739 aaKnown RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GMPSP49915 693 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PIGHQ14442 188 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PLCB4Q15147 1175 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SLC1A5Q15758 541 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FASTKD1Q53R41 847 aaKnown RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ATF7IP2Q5U623 682 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PPIL6Q8IXY8 311 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms