RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 TWF2Q6IBS0 349 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 TAF2Q6P1X5 1199 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RAB42Q8N4Z0 105 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 SCFD2Q8WU76 684 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RABL2AQ9UBK7 228 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RTN3O95197 1032 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RASA2Q15283 850 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 DDX53Q86TM3 631 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RPH3AQ9Y2J0 694 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 NMT2O60551 498 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 FAM58BPP0C7Q3 252 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 FASTKD5Q7L8L6 764 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 SPATA18Q8TC71 538 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GRIP2Q9C0E4 1043 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 KLHL3Q9UH77 587 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CCDC182A6NF36 153 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 C3orf70A6NLC5 250 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 HMBSP08397 361 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CDH3P22223 829 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 YY1P25490 414 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GEMIN4P57678 1058 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 TRAP1Q12931 704 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ASAP3Q8TDY4 903 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 C7orf25Q9BPX7 421 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ZNF224Q9NZL3 707 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 STAP1Q9ULZ2 295 aa13.24□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GNB5O14775 395 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 SCGNO76038 276 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 JAK1P23458 1154 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PRELPP51888 382 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GDPD5Q8WTR4 605 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CHRNB3Q05901 458 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PNKPQ96T60 521 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GRIK1P39086 918 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 B3GNT6Q6ZMB0 384 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CASKIN2Q8WXE0 1202 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CYP4F12Q9HCS2 524 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PTPRHQ9HD43 1115 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 POU4F1Q01851 419 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RUNDC3AQ59EK9 446 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PERM1Q5SV97 790 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 NACC2Q96BF6 587 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 JMJD4Q9H9V9 463 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 LCMT1Q9UIC8 334 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 NEDD4P46934 1319 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 MAGEA2P43356 314 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 TRAF3Q13114 568 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 TUBA3CQ13748 450 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PTRHD1Q6GMV3 140 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 NEK5Q6P3R8 708 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 JAMLQ86YT9 394 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 BEST2Q8NFU1 509 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 DDX50Q9BQ39 737 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 A8MXQ7 604 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GLRBP48167 497 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 GALCP54803 685 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 NR1D2Q14995 579 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ULK3Q6PHR2 472 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ELMOD1Q8N336 334 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 IPMKQ8NFU5 416 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ZNF285Q96NJ3 590 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 APOL4Q9BPW4 351 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 TJP2Q9UDY2 1190 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 BTBD3Q9Y2F9 522 aa13.23□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ALOX15P16050 662 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 MAGEA10P43363 369 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 SERPINB9P50453 376 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 BNC2Q6ZN30 1099 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 LRRC74BQ6ZQY2 392 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 FAM71DQ8N9W8 422 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 RBBP8Q99708 897 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 USP17L5A8MUK1 530 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ZNF554Q86TJ5 538 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 PARP8Q8N3A8 854 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 ZSCAN18Q8TBC5 510 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 TPD52L3Q96J77 140 aa13.22□□□□□ -0.29
RAB11FIP1-202ENST00000330843 FOPNLQ96NB1 174 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms