RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 C22orf31O95567 290 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 TGFB3P10600 412 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 STX2P32856 288 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 ICAM3P32942 547 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 HUNKP57058 714 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 NME3Q13232 169 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 PPP1R26Q5T8A7 1209 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 CASC4Q6P4E1 433 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 STKLD1Q8NE28 680 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 RXFP2Q8WXD0 754 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 NINJ2Q9NZG7 142 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 IL1RAPL1Q9NZN1 696 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 DDX20Q9UHI6 824 aaKnown RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 MAD1L1Q9Y6D9 718 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 ADGRA2Q96PE1 1338 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 SLC25A27O95847 323 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 CYP2C9P11712 490 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 LMO2P25791 158 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 TNFRSF8P28908 595 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 RAD23BP54727 409 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 YWHAGP61981 247 aaKnown RBP eCLIP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 SEPT7Q16181 437 aaKnown RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 SH3D19Q5HYK7 790 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 UNC45BQ8IWX7 931 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 CACNA2D3Q8IZS8 1091 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 NPLOC4Q8TAT6 608 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 LPPQ93052 612 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 SLITRK1Q96PX8 696 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 XYLT2Q9H1B5 865 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 PDZD7Q9H5P4 517 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 STK38LQ9Y2H1 464 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 C5orf42Q9H799 3197 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 TMEM191CA6NGB0 347 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 FSCN2O14926 492 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 LRCH4O75427 683 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 TJP3O95049 919 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 CSPG5O95196 566 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 AFF1P51825 1210 aaKnown RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 CRADDP78560 199 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 EXOC3L1Q86VI1 746 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 KIF2BQ8N4N8 673 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 DHX35Q9H5Z1 703 aaKnown RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 PCYOX1Q9UHG3 505 aa11.2□□□□□ -0.62
CUL4A-201ENST00000326335 CES2O00748 559 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 TREHO43280 583 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 RBP3P10745 1247 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 MAGEA4P43358 317 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 GHRHRQ02643 423 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 CCDC62Q6P9F0 684 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 ZPBP2Q6X784 338 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 GPR142Q7Z601 462 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 FAM131BQ86XD5 332 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 SLC4A11Q8NBS3 891 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 SEC16BQ96JE7 1060 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 XPO6Q96QU8 1125 aaKnown RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 PGK1P00558 417 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 EIF3EP60228 445 aaKnown RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 SNRPFP62306 86 aaKnown RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 CCNA1P78396 465 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 MREGQ8N565 214 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 ATXN7L3BQ96GX2 97 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 TMEM176AQ96HP8 235 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 EIF4E1BA6NMX2 242 aaKnown RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 CXCL11O14625 94 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 MAPK13O15264 365 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 MEFVO15553 781 aaPredicted RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 CREB3O43889 395 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 CALB1P05937 261 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 DNAJC3Q13217 504 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 GKAP1Q5VSY0 366 aaPredicted RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 PMF1Q6P1K2 205 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 C2orf40Q9H1Z8 148 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 NUDT5Q9UKK9 219 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 NAALADL1Q9UQQ1 740 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
CUL4A-201ENST00000326335 MFHAS1Q9Y4C4 1052 aa11.19□□□□□ -0.62
CUL4A-201ENST00000326335 MYO7AQ13402 2215 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 A0A1W2PPM1 405 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 PRPSAP2O60256 369 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 RECQL4O94761 1208 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 APRTP07741 180 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 EDNRBP24530 442 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 MNAT1P51948 309 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 RTP1P59025 263 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 MCL1Q07820 350 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 OVGP1Q12889 678 aa11.18□□□□□ -0.62
CUL4A-201ENST00000326335 PPIL2Q13356 520 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms