RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 PDE11AQ9HCR9 933 aa21.31■■□□□ 1
SSH2-202ENST00000324677 SEMA4GQ9NTN9 838 aa21.31■■□□□ 1
SSH2-202ENST00000324677 SIX4Q9UIU6 781 aa21.31■■□□□ 1
SSH2-202ENST00000324677 GTF3C4Q9UKN8 822 aa21.31■■□□□ 1
SSH2-202ENST00000324677 SNX9Q9Y5X1 595 aa21.31■■□□□ 1
SSH2-202ENST00000324677 KIAA1549LQ6ZVL6 1849 aa21.3■■□□□ 1
SSH2-202ENST00000324677 DCDC2BA2VCK2 349 aa21.3■■□□□ 1
SSH2-202ENST00000324677 TRDMT1O14717 391 aaKnown RBP21.3■■□□□ 1
SSH2-202ENST00000324677 TADA3O75528 432 aa21.3■■□□□ 1
SSH2-202ENST00000324677 NOL4O94818 638 aa21.3■■□□□ 1
SSH2-202ENST00000324677 KRT19P08727 400 aa21.3■■□□□ 1
SSH2-202ENST00000324677 RBP5P82980 135 aa21.3■■□□□ 1
SSH2-202ENST00000324677 GRSF1Q12849 480 aaKnown RBP eCLIP21.3■■□□□ 1
SSH2-202ENST00000324677 ZNF268Q14587 947 aaPredicted RBP21.3■■□□□ 1
SSH2-202ENST00000324677 SLC39A14Q15043 492 aa21.3■■□□□ 1
SSH2-202ENST00000324677 FSTL4Q6MZW2 842 aa21.3■■□□□ 1
SSH2-202ENST00000324677 TOP6BLQ8N6T0 577 aa21.3■■□□□ 1
SSH2-202ENST00000324677 NOC3LQ8WTT2 800 aaKnown RBP21.3■■□□□ 1
SSH2-202ENST00000324677 TRMT2BQ96GJ1 504 aaKnown RBP21.3■■□□□ 1
SSH2-202ENST00000324677 MYRFLQ96LU7 910 aa21.3■■□□□ 1
SSH2-202ENST00000324677 USP28Q96RU2 1077 aa21.3■■□□□ 1
SSH2-202ENST00000324677 MTMR12Q9C0I1 747 aa21.3■■□□□ 1
SSH2-202ENST00000324677 UXTQ9UBK9 157 aaPredicted RBP21.3■■□□□ 1
SSH2-202ENST00000324677 GABRDO14764 452 aa21.29■■□□□ 1
SSH2-202ENST00000324677 PRPF6O94906 941 aaKnown RBP21.29■■□□□ 1
SSH2-202ENST00000324677 TMEM191BP0C7N4 346 aa21.29■■□□□ 1
SSH2-202ENST00000324677 LHX1P48742 406 aa21.29■■□□□ 1
SSH2-202ENST00000324677 CSRP2Q16527 193 aa21.29■■□□□ 1
SSH2-202ENST00000324677 CCDC142Q17RM4 750 aa21.29■■□□□ 1
SSH2-202ENST00000324677 CFAP221Q4G0U5 840 aa21.29■■□□□ 1
SSH2-202ENST00000324677 CC2D1AQ6P1N0 951 aaPredicted RBP21.29■■□□□ 1
SSH2-202ENST00000324677 PRR23CQ6ZRP0 262 aa21.29■■□□□ 1
SSH2-202ENST00000324677 CEP68Q76N32 757 aa21.29■■□□□ 1
SSH2-202ENST00000324677 ADGRF2Q8IZF7 708 aa21.29■■□□□ 1
SSH2-202ENST00000324677 GPD1LQ8N335 351 aa21.29■■□□□ 1
SSH2-202ENST00000324677 FAM160A2Q8N612 972 aaPredicted RBP21.29■■□□□ 1
SSH2-202ENST00000324677 NETO1Q8TDF5 533 aa21.29■■□□□ 1
SSH2-202ENST00000324677 HCRTO43612 131 aa21.28■■□□□ 1
SSH2-202ENST00000324677 ARSAP15289 507 aa21.28■■□□□ 1
SSH2-202ENST00000324677 PCSK1P29120 753 aa21.28■■□□□ 1
SSH2-202ENST00000324677 AMPD2Q01433 879 aa21.28■■□□□ 1
SSH2-202ENST00000324677 PDGFRLQ15198 375 aa21.28■■□□□ 1
SSH2-202ENST00000324677 SOWAHAQ2M3V2 549 aa21.28■■□□□ 1
SSH2-202ENST00000324677 LMBRD2Q68DH5 695 aaPredicted RBP21.28■■□□□ 1
SSH2-202ENST00000324677 CCDC65Q8IXS2 484 aa21.28■■□□□ 1
SSH2-202ENST00000324677 PDILTQ8N807 584 aa21.28■■□□□ 1
SSH2-202ENST00000324677 FUBP3Q96I24 572 aaKnown RBP eCLIP21.28■■□□□ 1
SSH2-202ENST00000324677 MTMR6Q9Y217 621 aa21.28■■□□□ 1
SSH2-202ENST00000324677 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.27■■□□□ 1
SSH2-202ENST00000324677 SLC30A4O14863 429 aa21.27■■□□□ 1
SSH2-202ENST00000324677 KIAA0391O15091 583 aaKnown RBP21.27■■□□□ 1
SSH2-202ENST00000324677 ATG13O75143 517 aa21.27■■□□□ 1
SSH2-202ENST00000324677 FAM160A1Q05DH4 1040 aa21.27■■□□□ 1
SSH2-202ENST00000324677 FAM171BQ6P995 826 aa21.27■■□□□ 1
SSH2-202ENST00000324677 DPH6Q7L8W6 267 aa21.27■■□□□ 1
SSH2-202ENST00000324677 LIMS2Q7Z4I7 341 aa21.27■■□□□ 1
SSH2-202ENST00000324677 SPATA2LQ8IUW3 424 aaPredicted RBP21.27■■□□□ 1
SSH2-202ENST00000324677 ANKRD36BP1Q96IX9 119 aa21.27■■□□□ 1
SSH2-202ENST00000324677 SLC22A12Q96S37 553 aa21.27■■□□□ 1
SSH2-202ENST00000324677 INTS13Q9NVM9 706 aa21.27■■□□□ 1
SSH2-202ENST00000324677 PTPRJQ12913 1337 aa21.27■□□□□ 0.99
SSH2-202ENST00000324677 TPRP12270 2363 aaKnown RBP21.26■□□□□ 0.99
SSH2-202ENST00000324677 CCDC163A0A0D9SF12 145 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 RNF40O75150 1001 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 EGFP01133 1207 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 DRD1P21728 446 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 PXNP49023 591 aaPredicted RBP21.26■□□□□ 0.99
SSH2-202ENST00000324677 GALK1P51570 392 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 MYO1EQ12965 1108 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 MTF1Q14872 753 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 ZNF77Q15935 545 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 SCN4BQ8IWT1 228 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 GLIS3Q8NEA6 775 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 OR5B17Q8NGF7 314 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 GAB3Q8WWW8 586 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 INTS4Q96HW7 963 aaKnown RBP21.26■□□□□ 0.99
SSH2-202ENST00000324677 CYP2S1Q96SQ9 504 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 ZSCAN16Q9H4T2 348 aaPredicted RBP21.26■□□□□ 0.99
SSH2-202ENST00000324677 FBRSL1Q9HCM7 1045 aaKnown RBP21.26■□□□□ 0.99
SSH2-202ENST00000324677 TRPC7Q9HCX4 862 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 SLC8A2Q9UPR5 921 aa21.26■□□□□ 0.99
SSH2-202ENST00000324677 R3HCC1Q9Y3T6 440 aaKnown RBP21.26■□□□□ 0.99
SSH2-202ENST00000324677 LAMA1P25391 3075 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 TRAV19A0A0A6YYK7 116 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 ZNF233A6NK53 670 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 FOXD2O60548 495 aaPredicted RBP21.25■□□□□ 0.99
SSH2-202ENST00000324677 TNNC2P02585 160 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 USP17L7P0C7H9 530 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 GJA4P35212 333 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 MAGEA11P43364 429 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 NASPP49321 788 aaPredicted RBP21.25■□□□□ 0.99
SSH2-202ENST00000324677 SURF1Q15526 300 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 STXBP4Q6ZWJ1 553 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 CBWD2Q8IUF1 395 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 CPA6Q8N4T0 437 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 OSCP1Q8WVF1 389 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 KBTBD7Q8WVZ9 684 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 HPS3Q969F9 1004 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 HPDLQ96IR7 371 aa21.25■□□□□ 0.99
SSH2-202ENST00000324677 P2RY13Q9BPV8 354 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms