RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 IL23AQ9NPF7 189 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
DDX39A-202ENST00000324340 SALL4Q9UJQ4 1053 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 FAN1Q9Y2M0 1017 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 A8MXQ7 604 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 KIF4AO95239 1232 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 ODC1P11926 461 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 CD19P15391 556 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 TYMPP19971 482 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 LMO2P25791 158 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 LHX1P48742 406 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 GATMP50440 423 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 HADHBP55084 474 aaKnown RBP13.5□□□□□ -0.25
DDX39A-202ENST00000324340 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
DDX39A-202ENST00000324340 ORC1Q13415 861 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 LCLAT1Q6UWP7 414 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 DSTYKQ6XUX3 929 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 MON1BQ7L1V2 547 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 DNAAF5Q86Y56 855 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 CNPY4Q8N129 248 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 MICALL1Q8N3F8 863 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 WDTC1Q8N5D0 677 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 TMEM35BQ8NCS4 154 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-202ENST00000324340 VCPIP1Q96JH7 1222 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 TNIP3Q96KP6 325 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 CALR3Q96L12 384 aaKnown RBP13.5□□□□□ -0.25
DDX39A-202ENST00000324340 WDR24Q96S15 920 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 THAP2Q9H0W7 228 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 RC3H2Q9HBD1 1191 aaKnown RBP13.5□□□□□ -0.25
DDX39A-202ENST00000324340 DNAJB4Q9UDY4 337 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 GTF3C4Q9UKN8 822 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 DSEQ9UL01 958 aa13.5□□□□□ -0.25
DDX39A-202ENST00000324340 MACROD2A1Z1Q3 448 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 TARSL2A2RTX5 802 aaKnown RBP13.49□□□□□ -0.25
DDX39A-202ENST00000324340 TBKBP1A7MCY6 615 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 AMHP03971 560 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 CYP1A2P05177 515 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 ITGB1P05556 798 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 MYBL1P10243 752 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 MMP8P22894 467 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
DDX39A-202ENST00000324340 RGS19P49795 217 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 WDR5P61964 334 aaKnown RBP13.49□□□□□ -0.25
DDX39A-202ENST00000324340 GPC5P78333 572 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
DDX39A-202ENST00000324340 PTP4A2Q12974 167 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 MCOLN2Q8IZK6 566 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 LRRC43Q8N309 656 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 CPA5Q8WXQ8 436 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 RFFLQ8WZ73 363 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-202ENST00000324340 TRIM11Q96F44 468 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
DDX39A-202ENST00000324340 CTAGE15A4D2H0 777 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 EBAG9O00559 213 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 HCRTO43612 131 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 MTA2O94776 668 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 MICAL2O94851 1124 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 CTAGE8P0CG41 777 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 ABCB4P21439 1286 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 GPD2P43304 727 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 BRCC3P46736 316 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■■□□□ 12.2
DDX39A-202ENST00000324340 PKDCCQ504Y2 493 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 ZNF569Q5MCW4 686 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 PPP1R26Q5T8A7 1209 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-202ENST00000324340 DENND1BQ6P3S1 775 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 C16orf59Q7L2K0 433 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 CTAGE6Q86UF2 777 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 PASD1Q8IV76 773 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 CTAGE4Q8IX94 777 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 RHOT2Q8IXI1 618 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 B3GALNT2Q8NCR0 500 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 TRIM58Q8NG06 486 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 ARHGEF26Q96DR7 871 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 AVENQ9NQS1 362 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-202ENST00000324340 DDX43Q9NXZ2 648 aaKnown RBP13.48□□□□□ -0.25
DDX39A-202ENST00000324340 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 CAPN6Q9Y6Q1 641 aa13.48□□□□□ -0.25
DDX39A-202ENST00000324340 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-202ENST00000324340 F8W810 466 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 NRP1O14786 923 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 TRAPPC3O43617 180 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 MOCS3O95396 460 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ALDH2P05091 517 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ACRP10323 421 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-202ENST00000324340 OR1G1P47890 313 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms