RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 MRPS6P82932 125 aaKnown RBP17.93■□□□□ 0.46
SSR4-201ENST00000320857 NFX1Q12986 1120 aaKnown RBP17.93■□□□□ 0.46
SSR4-201ENST00000320857 KLF1Q13351 362 aaPredicted RBP17.93■□□□□ 0.46
SSR4-201ENST00000320857 LLGL1Q15334 1064 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 CCNG2Q16589 344 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 GLRA4Q5JXX5 417 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 TMC3Q7Z5M5 1100 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 POLNQ7Z5Q5 900 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 MCRS1Q96EZ8 462 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 MRPL45Q9BRJ2 306 aaKnown RBP17.93■□□□□ 0.46
SSR4-201ENST00000320857 HEMGNQ9BXL5 484 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 FAM204AQ9H8W3 233 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 MTRF1LQ9UGC7 380 aaKnown RBP17.93■□□□□ 0.46
SSR4-201ENST00000320857 GTF2IRD1Q9UHL9 959 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 TRPV2Q9Y5S1 764 aa17.93■□□□□ 0.46
SSR4-201ENST00000320857 GOLGA6CA6NDK9 693 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 PPEF2O14830 753 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 GAS8O95995 478 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 RPLP2P05387 115 aaKnown RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 GOLGA6DP0CG33 693 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 PTPN7P35236 360 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 RFC1P35251 1148 aaPredicted RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 RPL21P46778 160 aaKnown RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 PLTPP55058 493 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 DHX9Q08211 1270 aaKnown RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 DMTNQ08495 405 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 HADHQ16836 314 aaKnown RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 CXCL17Q6UXB2 119 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 ATL2Q8NHH9 583 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 UBA3Q8TBC4 463 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 RNF25Q96BH1 459 aaPredicted RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 SLITRK1Q96PX8 696 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 METTL5Q9NRN9 209 aaKnown RBP17.92■□□□□ 0.46
SSR4-201ENST00000320857 CHST7Q9NS84 486 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 GOLGA6AQ9NYA3 693 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 TSPAN16Q9UKR8 245 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 PLAAQ9Y263 795 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 PTPN22Q9Y2R2 807 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 IPPQ9Y573 584 aa17.92■□□□□ 0.46
SSR4-201ENST00000320857 PIRO00625 290 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 PPFIA2O75334 1257 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 TJP3O95049 919 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 SETSIPP0DME0 302 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 FLT3P36888 993 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 SNX1Q13596 522 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 ACAP1Q15027 740 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 GOLGA7BQ2TAP0 167 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 FBXO47Q5MNV8 452 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 TWF2Q6IBS0 349 aaKnown RBP17.91■□□□□ 0.46
SSR4-201ENST00000320857 ZDHHC24Q6UX98 284 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 ZNF771Q7L3S4 317 aaPredicted RBP17.91■□□□□ 0.46
SSR4-201ENST00000320857 FAM228AQ86W67 206 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 JOSD2Q8TAC2 188 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 FAM76AQ8TAV0 307 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 UBLCP1Q8WVY7 318 aaPredicted RBP17.91■□□□□ 0.46
SSR4-201ENST00000320857 HERPUD2Q9BSE4 406 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 XPNPEP3Q9NQH7 507 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 GRHL1Q9NZI5 618 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 KLK14Q9P0G3 267 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 TJP2Q9UDY2 1190 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 TRIM17Q9Y577 477 aa17.91■□□□□ 0.46
SSR4-201ENST00000320857 KRT7P08729 469 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 HOXD10P28358 340 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 CCND3P30281 292 aaPredicted RBP17.9■□□□□ 0.46
SSR4-201ENST00000320857 SNX16P57768 344 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 KRT17Q04695 432 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 SPOCD1Q6ZMY3 1216 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 KLHDC9Q8NEP7 349 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 OR6B3Q8NGW1 331 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 PKNOX2Q96KN3 472 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.9■□□□□ 0.46
SSR4-201ENST00000320857 SRRDQ9UH36 339 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 CDY2AQ9Y6F7 541 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 GOLGA6L10A6NI86 522 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 PRKAR2AP13861 404 aaKnown RBP17.9■□□□□ 0.46
SSR4-201ENST00000320857 TCF4P15884 667 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 TAF6P49848 677 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 LMNB2Q03252 620 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 CALCOCO2Q13137 446 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 PTK6Q13882 451 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 UAP1Q16222 522 aaPredicted RBP17.9■□□□□ 0.46
SSR4-201ENST00000320857 SV2CQ496J9 727 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 ATP13A4Q4VNC1 1196 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 MFSD7Q6UXD7 560 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 ACOT1Q86TX2 421 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 HACE1Q8IYU2 909 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 SMG8Q8ND04 991 aaKnown RBP17.9■□□□□ 0.46
SSR4-201ENST00000320857 ATG4AQ8WYN0 398 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 ART4Q93070 314 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 CCDC114Q96M63 670 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 TXLNGYQ9BZA5 131 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 KLHL11Q9NVR0 708 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 GDAP2Q9NXN4 497 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 WHRNQ9P202 907 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 HESX1Q9UBX0 185 aa17.9■□□□□ 0.46
SSR4-201ENST00000320857 KPNA7A9QM74 516 aa17.89■□□□□ 0.45
SSR4-201ENST00000320857 PI4K2BG5E9Z4 385 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms