RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 DCAF4L1Q3SXM0 396 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 SPDYCQ5MJ68 293 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 XYLT1Q86Y38 959 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 NT5DC4Q86YG4 428 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 TMEM40Q8WWA1 233 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 HAUS1Q96CS2 278 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 SNF8Q96H20 258 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 NT5C1AQ9BXI3 368 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 NXF3Q9H4D5 531 aaKnown RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 DNAJC17Q9NVM6 304 aaKnown RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 SMIM35A0A1B0GVV1 85 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 MBLAC1A4D2B0 266 aaPredicted RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 PPEF2O14830 753 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 EIF3HO15372 352 aaKnown RBP eCLIP7.98□□□□□ -1.13
IFT88-201ENST00000319980 CAND2O75155 1236 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 RPS6KA5O75582 802 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 MYL3P08590 195 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 NUDT17P0C025 328 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 DARSP14868 501 aaKnown RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 ITGA8P53708 1063 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 MAGOHP61326 146 aaKnown RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 PLCB3Q01970 1234 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 PDE4CQ08493 712 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 PTK6Q13882 451 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 TFDP3Q5H9I0 405 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 SPOCD1Q6ZMY3 1216 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 SYDE1Q6ZW31 735 aaPredicted RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 ARFGAP1Q8N6T3 406 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 NIPA2Q8N8Q9 360 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 CCDC89Q8N998 374 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 BCAS4Q8TDM0 211 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 C18orf25Q96B23 403 aaPredicted RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 CALCOCO1Q9P1Z2 691 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 WDR35Q9P2L0 1181 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 TUBGCP4Q9UGJ1 667 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 PCSK1NQ9UHG2 260 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 LCMT1Q9UIC8 334 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 TSPAN16Q9UKR8 245 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 DNPEPQ9ULA0 475 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 ZNF148Q9UQR1 794 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 PIN4Q9Y237 131 aaKnown RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 GRIN2DO15399 1336 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 PLXNB2O15031 1838 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 RIPK2O43353 540 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 IVLP07476 585 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 IL1R2P27930 398 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 CHKAP35790 457 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 PSMC4P43686 418 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 INCA1Q0VD86 236 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 BYSLQ13895 437 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 ZNF268Q14587 947 aaPredicted RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 FAM102AQ5T9C2 384 aaPredicted RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 APBB1IPQ7Z5R6 666 aaPredicted RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 ACOT1Q86TX2 421 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 PWWP2AQ96N64 755 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 PLEKHA5Q9HAU0 1116 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 KLK14Q9P0G3 267 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 SAE1Q9UBE0 346 aaPredicted RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 ANAPC5Q9UJX4 755 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 PLXNA1Q9UIW2 1896 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 hCG_1818297A0A087WSY0 165 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 A6NNZ2 444 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 LIASO43766 372 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 RECQL4O94761 1208 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 ACSL3O95573 720 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 CDKN2BP42772 138 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 SLCO1A2P46721 670 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 PSEN2P49810 448 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 CPT1AP50416 773 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 DYNLT1P63172 113 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 TUBB8Q3ZCM7 444 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 EMC10Q5UCC4 262 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 HOOK3Q86VS8 718 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 RASAL3Q86YV0 1011 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 ARFGAP2Q8N6H7 521 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 SNX27Q96L92 541 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 MRPL45Q9BRJ2 306 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 AP5M1Q9H0R1 490 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 FAM49BQ9NUQ9 324 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 DDX56Q9NY93 547 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 CWC15Q9P013 229 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 RSPH14Q9UHP6 348 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 NEU2Q9Y3R4 380 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 TLL2Q9Y6L7 1015 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 BRCA2P51587 3418 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 E5RJQ4 531 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 GRAP2O75791 330 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 RNF8O76064 485 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 STAU1O95793 577 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 CYP3A5P20815 502 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 LSP1P33241 339 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 MDH1P40925 334 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 RGS7P49802 495 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 SLC25A11Q02978 314 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 SNX17Q15036 470 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 HADHQ16836 314 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 PPP1R26Q5T8A7 1209 aaPredicted RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 RHBDF2Q6PJF5 856 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 SESTD1Q86VW0 696 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms