RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 CD48P09326 243 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 HSPA6P17066 643 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 NR1D1P20393 614 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 POU5F1BQ06416 359 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 MYO1EQ12965 1108 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 C15orf59Q2T9L4 293 aaPredicted RBP16.81■□□□□ 0.28
SHISA2-201ENST00000319420 PPP1R26Q5T8A7 1209 aaPredicted RBP16.81■□□□□ 0.28
SHISA2-201ENST00000319420 B3GNT5Q9BYG0 378 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 ZNF148Q9UQR1 794 aa16.81■□□□□ 0.28
SHISA2-201ENST00000319420 SCN1AP35498 2009 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 LSM8O95777 96 aaKnown RBP16.8■□□□□ 0.28
SHISA2-201ENST00000319420 MYZAPP0CAP1 466 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 IL1R2P27930 398 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 CPT1AP50416 773 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
SHISA2-201ENST00000319420 SKOR1P84550 965 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 SCYL2Q6P3W7 929 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 SCUBE3Q8IX30 993 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 LRRN4Q8WUT4 740 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 FAM107BQ9H098 131 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 C17orf102A2RUQ5 167 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 PPFIA2O75334 1257 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 RARBP10826 455 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 GRM5P41594 1212 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 SF3A3Q12874 501 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHISA2-201ENST00000319420 SLC29A2Q14542 456 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 CAPN12Q6ZSI9 719 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
SHISA2-201ENST00000319420 C3orf20Q8ND61 904 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 NT5C1AQ9BXI3 368 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 CALN1Q9BXU9 219 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 DCLK3Q9C098 648 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 ZFYVE28Q9HCC9 887 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 DNPEPQ9ULA0 475 aa16.8■□□□□ 0.28
SHISA2-201ENST00000319420 BARX2Q9UMQ3 279 aaPredicted RBP16.8■□□□□ 0.28
SHISA2-201ENST00000319420 CCDC130P13994 396 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 LMO2P25791 158 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 RABGGTBP53611 331 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 CYP1B1Q16678 543 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 CYP4F22Q6NT55 531 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 LRIG3Q6UXM1 1119 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 ITGA11Q9UKX5 1188 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.79■□□□□ 0.28
SHISA2-201ENST00000319420 A8MXQ7 604 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 PODXLO00592 558 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 EIF3HO15372 352 aaKnown RBP eCLIP16.79■□□□□ 0.28
SHISA2-201ENST00000319420 PMS2P54278 862 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 NRLP54845 237 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 XYLT1Q86Y38 959 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 ARFGAP1Q8N6T3 406 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 ARRDC4Q8NCT1 418 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 BCAS4Q8TDM0 211 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 LPPQ93052 612 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
SHISA2-201ENST00000319420 PCDHGC3Q9UN70 934 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
SHISA2-201ENST00000319420 C2CD2Q9Y426 696 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 NME7Q9Y5B8 376 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 PSTPIP1O43586 416 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 ELNP15502 786 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 ACAT1P24752 427 aaKnown RBP16.79■□□□□ 0.28
SHISA2-201ENST00000319420 CHKAP35790 457 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 KDM7AQ6ZMT4 941 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 CCDC33Q8N5R6 958 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 OSBPL7Q9BZF2 842 aa16.79■□□□□ 0.28
SHISA2-201ENST00000319420 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.79■□□□□ 0.28
SHISA2-201ENST00000319420 SPTLC1O15269 473 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 LRCH4O75427 683 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 HOXD8P13378 290 aaPredicted RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 GPD2P43304 727 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 FLT3LGP49771 235 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 SOX4Q06945 474 aaPredicted RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 PMF1Q6P1K2 205 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 SNX27Q96L92 541 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 SLITRK1Q96PX8 696 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 APBA2Q99767 749 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 TMEM121Q9BTD3 319 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 LRRC19Q9H756 370 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 GPATCH2LQ9NWQ4 482 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 MTRF1LQ9UGC7 380 aaKnown RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 SMIM28A0A1B0GU29 152 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 SMIM35A0A1B0GVV1 85 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 CCT5P48643 541 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 ITGA8P53708 1063 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 PURAQ00577 322 aaKnown RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 CLUL1Q15846 466 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 PAN2Q504Q3 1202 aaKnown RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 WNT8BQ93098 351 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 CFAP57Q96MR6 1250 aa16.78■□□□□ 0.28
SHISA2-201ENST00000319420 TIMM13Q9Y5L4 95 aaPredicted RBP16.78■□□□□ 0.28
SHISA2-201ENST00000319420 TCRBV5S1A1TA0A578 114 aa16.77■□□□□ 0.28
SHISA2-201ENST00000319420 FOXO6A8MYZ6 492 aa16.77■□□□□ 0.28
SHISA2-201ENST00000319420 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms