RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PNPLA8Q9NP80 782 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ANKEF1Q9NU02 776 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 PADI4Q9UM07 663 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ALS2Q96Q42 1657 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CLUHO75153 1309 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TRDMT1O14717 391 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 TNFAIP8O95379 198 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 VCLP18206 1134 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 GCAP28676 217 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 MYBPC3Q14896 1274 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 USH1GQ495M9 461 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 FSCBQ5H9T9 825 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 RARS2Q5T160 578 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 ZFP1Q6P2D0 407 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SLC47A2Q86VL8 602 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 AHI1Q8N157 1196 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SAMD3Q8N6K7 520 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TAS1R2Q8TE23 839 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SLC44A1Q8WWI5 657 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 RILPQ96NA2 401 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TUBGCP5Q96RT8 1024 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF577Q9BSK1 485 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 MRIQ9BWK5 157 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 COA1Q9GZY4 146 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TBC1D30Q9Y2I9 924 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ATRNL1Q5VV63 1379 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 A0A1W2PPM1 405 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CASQ2O14958 399 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CHMP2AO43633 222 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 AOC1P19801 751 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DNAJC24Q6P3W2 148 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 SETD3Q86TU7 594 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RTKN2Q8IZC4 609 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FBXO36Q8NEA4 188 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ADCY4Q8NFM4 1077 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FAM172AQ8WUF8 416 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DDX1Q92499 740 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FAM111AQ96PZ2 611 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 THAP1Q9NVV9 213 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RABGEF1Q9UJ41 708 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 WEE2P0C1S8 567 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CNTFP26441 200 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PRDX6P30041 224 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 QARSP47897 775 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 NEK3P51956 506 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 BST1Q10588 318 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 COG2Q14746 738 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 STXBP5Q5T5C0 1151 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 NCAPG2Q86XI2 1143 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RDM1Q8NG50 284 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MFSD14AQ96MC6 490 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ACAP3Q96P50 834 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FHDC1Q9C0D6 1143 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DEFB129Q9H1M3 183 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PCIF1Q9H4Z3 704 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 C6orf203Q9P0P8 240 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PI4KBQ9UBF8 816 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 COL18A1P39060 1754 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CICQ96RK0 1608 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TMEM191CA6NGB0 347 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 H3BNX3 289 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 SGK1O00141 431 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 COQ9O75208 318 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 UPP2O95045 317 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TMEM191BP0C7N4 346 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 GLRA2P23416 452 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 STX3Q13277 289 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MAMLD1Q13495 774 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 GRM2Q14416 872 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CERKLQ49MI3 558 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TFDP3Q5H9I0 405 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MFSD7Q6UXD7 560 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 THNSL1Q8IYQ7 743 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 NUP93Q8N1F7 819 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ACMSDQ8TDX5 336 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DLG3Q92796 817 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 SLITRK1Q96PX8 696 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PLEKHG4BQ96PX9 1271 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 UBE2OQ9C0C9 1292 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FBXO6Q9NRD1 293 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 GINM1Q9NU53 330 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PSMD13Q9UNM6 376 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DTNAQ9Y4J8 743 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PPME1Q9Y570 386 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 SQORQ9Y6N5 450 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 UBR2Q8IWV8 1755 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DENND3A2RUS2 1198 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 WDR91A4D1P6 747 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PDK3Q15120 406 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MAPK6Q16659 721 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 B3GNT9Q6UX72 402 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RHPN2Q8IUC4 686 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MARVELD2Q8N4S9 558 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PPP4R1Q8TF05 950 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FNIP1Q8TF40 1166 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DNAAF2Q9NVR5 837 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DNPEPQ9ULA0 475 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RAB26Q9ULW5 256 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms