RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ADSSP30520 456 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 PSMC4P43686 418 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 NOMO3P69849 1222 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 CDC42EP1Q00587 391 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 DNAJC3Q13217 504 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 PID1Q7Z2X4 250 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 CRLF3Q8IUI8 442 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 RNF139Q8WU17 664 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 GMLQ99445 158 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 ARHGAP28Q9P2N2 729 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 USP18Q9UMW8 372 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 CNTNAP1P78357 1384 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 CTSHP09668 335 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 KITP10721 976 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 VCPP55072 806 aaKnown RBP14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 COPS2P61201 443 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 ABI1Q8IZP0 508 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 AFAP1L2Q8N4X5 818 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 NEUROG2Q9H2A3 272 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 TLK1Q9UKI8 766 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 MYPNQ86TC9 1320 aa14.04□□□□□ -0.16
PCDHB9-201ENST00000316105 LACTBL1A8MY62 500 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 MAFO75444 373 aaPredicted RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 EPHX2P34913 555 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 TAF1CQ15572 869 aaPredicted RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 MOB2Q70IA6 237 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 RXFP2Q8WXD0 754 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 VPS11Q9H270 941 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 XPNPEP1Q9NQW7 623 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 PPME1Q9Y570 386 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 CFAP69A5D8W1 941 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 CD4P01730 458 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 C6orf222P0C671 652 aaPredicted RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 GNL1P36915 607 aaPredicted RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 ARFIP2P53365 341 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 ARPP19P56211 112 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 RPL7AP62424 266 aaKnown RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 PTK7Q13308 1070 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 MORF4L2Q15014 288 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 KATNAL2Q8IYT4 538 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 C3orf20Q8ND61 904 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 SMC1BQ8NDV3 1235 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 PGM2Q96G03 612 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 CRCPO75575 148 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 PTK6Q13882 451 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 ZBTB41Q5SVQ8 909 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 JADE1Q6IE81 842 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 LVRNQ6Q4G3 990 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 ZNF572Q7Z3I7 529 aaPredicted RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 SLFN11Q7Z7L1 901 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 C7orf43Q8WVR3 580 aa14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 ZNF214Q9UL59 606 aaPredicted RBP14.03□□□□□ -0.16
PCDHB9-201ENST00000316105 TCRBV7S2A1N4TA0A589 114 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 RRN3P2A6NIE6 340 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 FARP2O94887 1054 aaPredicted RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 ZSCAN5DPP0CG00 497 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 NDST1P52848 882 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 DRG2P55039 364 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 GEMIN4P57678 1058 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 SEPT6Q14141 434 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 CNPY3Q9BT09 278 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 CYP3A43Q9HB55 503 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 NINJ2Q9NZG7 142 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 NAALADL1Q9UQQ1 740 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 ZNF541Q9H0D2 1346 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 A0A0B4J269 797 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 PABPN1LA6NDY0 278 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 CFAP73A6NFT4 308 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 TNPO2O14787 897 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 HAUS5O94927 633 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 PECAM1P16284 738 aaPredicted RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 EIF4BP23588 611 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 STIP1P31948 543 aaKnown RBP14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 SLC20A2Q08357 652 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 DCAF4L1Q3SXM0 396 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 DCAF6Q58WW2 860 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 NUDCD3Q8IVD9 361 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 SCN4BQ8IWT1 228 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 CEP120Q8N960 986 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 FBXO36Q8NEA4 188 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 AGAP3Q96P47 875 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 SIK2Q9H0K1 926 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 PPCSQ9HAB8 311 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 NPHS2Q9NP85 383 aa14.02□□□□□ -0.16
PCDHB9-201ENST00000316105 ATP8B3O60423 1300 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 A0A1B0GUL6 1792 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 MCF2P10911 925 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 KRT4P19013 534 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 ZNF280AP59817 542 aaPredicted RBP14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 POTEAQ6S8J7 498 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 ZC3H3Q8IXZ2 948 aaKnown RBP14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 CCDC33Q8N5R6 958 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 FAM172AQ8WUF8 416 aa14.02□□□□□ -0.17
PCDHB9-201ENST00000316105 OSMRQ99650 979 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms