RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CETN2P41208 172 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 FLT3LGP49771 235 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 CCNG2Q16589 344 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 NBPF20Q3BBV1 942 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 XKR4Q5GH76 650 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 CEP85LQ5SZL2 805 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 PPP1R26Q5T8A7 1209 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-201ENST00000315286 MFSD14CQ5VZR4 134 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 KAZNQ674X7 775 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 TAF2Q6P1X5 1199 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 LRIG3Q6UXM1 1119 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 FAM228AQ86W67 206 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 SMG8Q8ND04 991 aaKnown RBP19.36■□□□□ 0.69
CCDC43-201ENST00000315286 FAM76AQ8TAV0 307 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 HOMER3Q9NSC5 361 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 IPPQ9Y573 584 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 PIK3R2O00459 728 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 LRCH4O75427 683 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 KCNE1P15382 129 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 SOWAHAQ2M3V2 549 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 GOLGA7BQ2TAP0 167 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 ARRDC4Q8NCT1 418 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 ATL2Q8NHH9 583 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 ART4Q93070 314 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 CD4P01730 458 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 ATF7P17544 494 aaPredicted RBP19.35■□□□□ 0.69
CCDC43-201ENST00000315286 TRIM32Q13049 653 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 KCTD16Q68DU8 428 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 SPOCD1Q6ZMY3 1216 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 SESTD1Q86VW0 696 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 OR6B3Q8NGW1 331 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 CCDC114Q96M63 670 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 GTF2IRD1Q9UHL9 959 aa19.35■□□□□ 0.69
CCDC43-201ENST00000315286 SPTLC1O15269 473 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 IL1R2P27930 398 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 SLC25A11Q02978 314 aaKnown RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 SOX4Q06945 474 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 TWF2Q6IBS0 349 aaKnown RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 GDF6Q6KF10 455 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 GRK7Q8WTQ7 553 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 GOLGA2P5Q9HBQ8 144 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 FAM49BQ9NUQ9 324 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 DDX56Q9NY93 547 aaKnown RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 FEZ2Q9UHY8 353 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 CDY2AQ9Y6F7 541 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 LRRD1A4D1F6 860 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 E5RJQ4 531 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 TULP2O00295 520 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 TP73O15350 636 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 HCRTO43612 131 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 COPS2P61201 443 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 MRPS6P82932 125 aaKnown RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 ZNF844Q08AG5 666 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 PTK6Q13882 451 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 STILQ15468 1287 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 TRIP13Q15645 432 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 PKDCCQ504Y2 493 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 ODF2Q5BJF6 829 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 FAM102AQ5T9C2 384 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 SYDE1Q6ZW31 735 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 PAXIP1Q6ZW49 1069 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 POLNQ7Z5Q5 900 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 TTC30AQ86WT1 665 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 SH2D3CQ8N5H7 860 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 IPO4Q8TEX9 1081 aaKnown RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 WNT8BQ93098 351 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 LPIN3Q9BQK8 851 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 ZWILCHQ9H900 591 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 MTRF1LQ9UGC7 380 aaKnown RBP19.34■□□□□ 0.69
CCDC43-201ENST00000315286 ASIC3Q9UHC3 531 aa19.34■□□□□ 0.69
CCDC43-201ENST00000315286 KPNA7A9QM74 516 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 TJP3O95049 919 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 IVDP26440 423 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 CDKN2BP42772 138 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 RGS7P49802 495 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 PRKCZQ05513 592 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 SMTNL2Q2TAL5 461 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 TFDP3Q5H9I0 405 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 UPF3AQ9H1J1 476 aaKnown RBP19.33■□□□□ 0.69
CCDC43-201ENST00000315286 EPB41L4BQ9H329 900 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 DPEP3Q9H4B8 488 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 WHRNQ9P202 907 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 NEU2Q9Y3R4 380 aa19.33■□□□□ 0.69
CCDC43-201ENST00000315286 hCG_1818297A0A087WSY0 165 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 A8MXQ7 604 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 GAS8O95995 478 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 PMS2P54278 862 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 CAP1Q01518 475 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 CALCOCO2Q13137 446 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 KCNT1Q5JUK3 1230 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 SPDYCQ5MJ68 293 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 OR6B2Q6IFH4 312 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 CYP4F22Q6NT55 531 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 PMF1Q6P1K2 205 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 FAM183BPQ6ZVS7 135 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 UNC93AQ86WB7 457 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 KBTBD7Q8WVZ9 684 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 PIWIL1Q96J94 861 aaKnown RBP19.32■□□□□ 0.68
CCDC43-201ENST00000315286 SPC25Q9HBM1 224 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms