RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 TDP1Q9NUW8 608 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 ZSCAN32Q9NX65 697 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 RAB23Q9ULC3 237 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 SCN1AP35498 2009 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
CKS2-201ENST00000314355 TCHHQ07283 1943 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 A0A1B0GVL5 298 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 SLC38A8A6NNN8 435 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 TRIM66O15016 1216 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 TGFB1I1O43294 461 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 P4HA1P13674 534 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
CKS2-201ENST00000314355 MAGEA11P43364 429 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 SYKP43405 635 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 CXCL12P48061 93 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 NR1H3Q13133 447 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 BECN1Q14457 450 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 ITPRIPL2Q3MIP1 535 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 MON1AQ86VX9 555 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 C12orf56Q8IXR9 622 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 RUBCNQ92622 972 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 PAGE5Q96GU1 130 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 IL21Q9HBE4 155 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 TRPC7Q9HCX4 862 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 GKN1Q9NS71 199 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 TMLHEQ9NVH6 421 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 SIX4Q9UIU6 781 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
CKS2-201ENST00000314355 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 MYBPHLA2RUH7 354 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 A8MXQ7 604 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 SPECC1L-ADORA2AF8WAN1 911 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 CALUO43852 315 aaPredicted RBP13.56□□□□□ -0.24
CKS2-201ENST00000314355 TACC1O75410 805 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 CST3P01034 146 aaPredicted RBP13.56□□□□□ -0.24
CKS2-201ENST00000314355 F11P03951 625 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 USP17L7P0C7H9 530 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 CASP1P29466 404 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 PPP3CCP48454 512 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 MTAPQ13126 283 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 KCNB1Q14721 858 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 BMT2Q1RMZ1 405 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 TXNDC8Q6A555 127 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 FAM171BQ6P995 826 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 GPR161Q8N6U8 529 aaKnown RBP13.56□□□□□ -0.24
CKS2-201ENST00000314355 TTC16Q8NEE8 873 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 TTC8Q8TAM2 541 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 TRMT2BQ96GJ1 504 aaKnown RBP13.56□□□□□ -0.24
CKS2-201ENST00000314355 CHRDQ9H2X0 955 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 TRPM5Q9NZQ8 1165 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 NCDNQ9UBB6 729 aa13.56□□□□□ -0.24
CKS2-201ENST00000314355 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
CKS2-201ENST00000314355 PDXKO00764 312 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 ATG13O75143 517 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 CKMP06732 381 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 PFKFB1P16118 471 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 HMGA1P17096 107 aaKnown RBP13.55□□□□□ -0.24
CKS2-201ENST00000314355 BDNFP23560 247 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 LMO2P25791 158 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 HOXD13P35453 343 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 GPR15P49685 360 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 PSMC1P62191 440 aaKnown RBP13.55□□□□□ -0.24
CKS2-201ENST00000314355 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 EHHADHQ08426 723 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
CKS2-201ENST00000314355 RUNX3Q13761 415 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 ZNF268Q14587 947 aaPredicted RBP13.55□□□□□ -0.24
CKS2-201ENST00000314355 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 KMT5BQ4FZB7 885 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 ZNF667Q5HYK9 610 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 TDRD10Q5VZ19 366 aaKnown RBP13.55□□□□□ -0.24
CKS2-201ENST00000314355 DENND5BQ6ZUT9 1274 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 SPEM1Q8N4L4 309 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 CCDC26Q8TAB7 109 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 MYCBPAPQ8TBZ2 947 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 MKNK1Q9BUB5 465 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
CKS2-201ENST00000314355 MIA3Q5JRA6 1907 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 NRG2O14511 850 aaPredicted RBP13.54□□□□□ -0.24
CKS2-201ENST00000314355 NOL4O94818 638 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
CKS2-201ENST00000314355 RPN1P04843 607 aaKnown RBP13.54□□□□□ -0.24
CKS2-201ENST00000314355 PFKLP17858 780 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 PTPN1P18031 435 aaKnown RBP13.54□□□□□ -0.24
CKS2-201ENST00000314355 HDCP19113 662 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
CKS2-201ENST00000314355 CTHP32929 405 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms