RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 GPR20Q99678 358 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 TCP11X1B4DZS4 312 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ZBTB22O15209 634 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 RFC1P35251 1148 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 NR1H3Q13133 447 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 TTMPQ5BVD1 217 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 BBS5Q8N3I7 341 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SPDYE5A6NIY4 337 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 EIF4BP23588 611 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 PGBD4Q96DM1 585 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 DDX23Q9BUQ8 820 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CCDC68Q9H2F9 335 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 RNPEPQ9H4A4 650 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CYP3A43Q9HB55 503 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 DCTN3O75935 186 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FLT3P36888 993 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ACTN3Q08043 901 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 DENND1BQ6P3S1 775 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SPATA2LQ8IUW3 424 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SMC1BQ8NDV3 1235 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 DCLK3Q9C098 648 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 PSMC3IPQ9P2W1 217 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 DNPEPQ9ULA0 475 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 KIAA1257Q9ULG3 409 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 AFG3L2Q9Y4W6 797 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 E2F8A0AVK6 867 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 STIP1P31948 543 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 MYCBPAPQ8TBZ2 947 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ACO2Q99798 780 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SPON2Q9BUD6 331 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ARHGAP28Q9P2N2 729 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 PPARGC1AQ9UBK2 798 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ADAMTSL3P82987 1691 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 E5RJQ4 531 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 RIPK2O43353 540 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 HAUS5O94927 633 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CYP1A2P05177 515 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 NCAM1P13591 858 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 RGS2P41220 211 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SCUBE3Q8IX30 993 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SGSM3Q96HU1 749 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TEPSINQ96N21 525 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 NINJ2Q9NZG7 142 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 NAALADL1Q9UQQ1 740 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CPT1AP50416 773 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 MAP3K7CLP57077 242 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TPI1P60174 286 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 MCL1Q07820 350 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CNPY3Q9BT09 278 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■□□□□ 9.7
PRKDC-201ENST00000314191 RBPJLQ9UBG7 517 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 A0A0B4J269 797 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SYT17Q9BSW7 474 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 PAK5Q9P286 719 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 UMODL1Q5DID0 1318 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 BTNL10A8MVZ5 291 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 GIPC1O14908 333 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ZFXP17010 805 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TYK2P29597 1187 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 GRIK1P39086 918 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TAS2R40P59535 323 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TRIM68Q6AZZ1 485 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 GLB1LQ6UWU2 654 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 B3GAT3O94766 335 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ACADSBP45954 432 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 SMG5Q9UPR3 1016 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 H0Y3Z8 333 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CYB561D2O14569 222 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF844Q08AG5 666 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 OVGP1Q12889 678 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF268Q14587 947 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FBXO47Q5MNV8 452 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FAM117BQ6P1L5 589 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TINF2Q9BSI4 451 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 C4BPAP04003 597 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 RPL7AP62424 266 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 COG7P83436 770 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TFDP3Q5H9I0 405 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FBXW10Q5XX13 1052 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 CPNE8Q86YQ8 564 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 NUDCD3Q8IVD9 361 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 WDR75Q8IWA0 830 aaKnown RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FOXP3Q9BZS1 431 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ASB7Q9H672 318 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ITGA11Q9UKX5 1188 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 FAM47DPA6NHR8 397 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 TXNDC9O14530 226 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 AP1G2O75843 785 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 PECAM1P16284 738 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-201ENST00000314191 ADSSP30520 456 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 PNPLA4P41247 253 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 DUPD1Q68J44 220 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 EPAS1Q99814 870 aa6.47□□□□□ -1.37
PRKDC-201ENST00000314191 NEUROG2Q9H2A3 272 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms