RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PTP4A2Q12974 167 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 CDC16Q13042 620 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 TMPRSS6Q8IU80 811 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 ULK2Q8IYT8 1036 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 SENP7Q9BQF6 1050 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 CENPKQ9BS16 269 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 ZWILCHQ9H900 591 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 SLC7A8Q9UHI5 535 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 A8MXQ7 604 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 STK10O94804 968 aaKnown RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 QARSP47897 775 aaKnown RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 IRX4P78413 519 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 CYP24A1Q07973 514 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 PRKD1Q15139 912 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 KLHL38Q2WGJ6 581 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 KCNT1Q5JUK3 1230 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 RAPH1Q70E73 1250 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 ACER1Q8TDN7 264 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 ZNF526Q8TF50 670 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 DCAKDQ8WVC6 231 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 RSAD2Q8WXG1 361 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 OPTNQ96CV9 577 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 NMD3Q96D46 503 aaKnown RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 NR1H4Q96RI1 486 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-202ENST00000310645 ACSS3Q9H6R3 686 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 DBNDD1Q9H9R9 158 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 ARHGEF4Q9NR80 690 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 EXOC7Q9UPT5 735 aa15.38■□□□□ 0.05
COL6A2-202ENST00000310645 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 I3L4J1 428 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 BBOX1O75936 387 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 SPATA31D3P0C874 917 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 EPHB1P54762 984 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 KRT72Q14CN4 511 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 UGCGQ16739 394 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 SPATA31D4Q6ZUB0 917 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 GSTCDQ8NEC7 633 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 CPT1BQ92523 772 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 CCDC124Q96CT7 223 aaKnown RBP15.37■□□□□ 0.05
COL6A2-202ENST00000310645 SHCBP1LQ9BZQ2 653 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 PHACTR1Q9C0D0 580 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 MMADHCQ9H3L0 296 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-202ENST00000310645 KMT5AQ9NQR1 393 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 NPTX2P47972 431 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 NOMO3P69849 1222 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 GSTA3Q16772 222 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 LPCAT4Q643R3 524 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 ACTL9Q8TC94 416 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 COA1Q9GZY4 146 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 TMX4Q9H1E5 349 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-202ENST00000310645 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 FAM198AQ9UFP1 575 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 XIRP1Q702N8 1843 aaKnown RBP15.37■□□□□ 0.05
COL6A2-202ENST00000310645 DNAJC6O75061 913 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 SERPINB2P05120 415 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 GCNT1Q02742 428 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 ST13P4Q8IZP2 240 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-202ENST00000310645 PDIK1LQ8N165 341 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 IL31RAQ8NI17 732 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 USP6NLQ92738 828 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 MXRA8Q9BRK3 442 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 WDR83Q9BRX9 315 aaKnown RBP15.37■□□□□ 0.05
COL6A2-202ENST00000310645 FBXO28Q9NVF7 368 aa15.37■□□□□ 0.05
COL6A2-202ENST00000310645 COPEO14579 308 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 HLA-DRAP01903 254 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 AQP5P55064 265 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 OTUD4Q01804 1114 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 CDHR3Q6ZTQ4 885 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 USP37Q86T82 979 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PPIL6Q8IXY8 311 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ARHGAP18Q8N392 663 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 GMCL1P1Q8NEA9 526 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 SLC26A7Q8TE54 656 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ZNF516Q92618 1163 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ALKBH8Q96BT7 664 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PCDH9Q9HC56 1237 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 CLIC5Q9NZA1 410 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 IP6K2Q9UHH9 426 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 XPO7Q9UIA9 1087 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 CYB561D2O14569 222 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PLSCR1O15162 318 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 HARSP12081 509 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 BPIFB4P59827 614 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 SPP2Q13103 211 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 UBAP2LQ14157 1087 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 OASLQ15646 514 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 IGDCC3Q8IVU1 814 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 TMEM161BQ8NDZ6 487 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 CFAP36Q96G28 342 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PARVAQ9NVD7 372 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms