RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PPM1LQ5SGD2 360 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 KLHDC7AQ5VTJ3 777 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 IQCEQ6IPM2 695 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 UNC93AQ86WB7 457 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 SPATA2LQ8IUW3 424 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 ANKRD20A12PQ8NF67 263 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 GIPC2Q8TF65 315 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 ZSWIM1Q9BR11 485 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 GPR88Q9GZN0 384 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 GANQ9H2C0 597 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 CD207Q9UJ71 328 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 DNAJC12Q9UKB3 198 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 USP15Q9Y4E8 981 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 PCDHB5Q9Y5E4 795 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 PCDHB4Q9Y5E5 795 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 NOTCH4Q99466 2003 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 MBTPS2O43462 519 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 BEST1O76090 585 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 C1RP00736 705 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 SERPINC1P01008 464 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 HAPLN1P10915 354 aaPredicted RBP9.67□□□□□ -0.86
PDE4D-201ENST00000309641 UCHL3P15374 230 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 HOXB8P17481 243 aaPredicted RBP9.67□□□□□ -0.86
PDE4D-201ENST00000309641 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 NFE2Q16621 373 aaPredicted RBP9.67□□□□□ -0.86
PDE4D-201ENST00000309641 CFAP221Q4G0U5 840 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
PDE4D-201ENST00000309641 SCN4BQ8IWT1 228 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 SPPL2BQ8TCT7 592 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 SLC2A14Q8TDB8 520 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 HDAC7Q8WUI4 952 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 TFAP2BQ92481 460 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 TMEM176AQ96HP8 235 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 TNIP3Q96KP6 325 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 KCNK16Q96T55 309 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 NAA15Q9BXJ9 866 aaKnown RBP9.67□□□□□ -0.86
PDE4D-201ENST00000309641 PRKD2Q9BZL6 878 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 ADAM7Q9H2U9 754 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 DZANK1Q9NVP4 752 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 THEGQ9P2T0 379 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 DNMT3BQ9UBC3 853 aaKnown RBP9.67□□□□□ -0.86
PDE4D-201ENST00000309641 COG5Q9UP83 839 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 PTPRDP23468 1912 aa9.67□□□□□ -0.86
PDE4D-201ENST00000309641 FSD2A1L4K1 749 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 F8VP50 259 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 FOXN3O00409 490 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 TPM2P07951 284 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 KRT5P13647 590 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 IL9P15248 144 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 SP100P23497 879 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 ADORA2BP29275 332 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 ZNF132P52740 706 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 RAPGEF1Q13905 1077 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 NR1I3Q14994 352 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 UVSSAQ2YD98 709 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 LEXMQ3ZCV2 418 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 FKBP15Q5T1M5 1219 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 POTEHQ6S545 545 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 CCDC149Q6ZUS6 474 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 GRASPQ7Z6J2 395 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 GPR149Q86SP6 731 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 FAM35AQ86V20 835 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 SHC3Q92529 594 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 SUSD6Q92537 303 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 SMG7Q92540 1137 aaKnown RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 HEXIM2Q96MH2 286 aaKnown RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 POMKQ9H5K3 350 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 NLRC4Q9NPP4 1024 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 ZDHHC7Q9NXF8 308 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 IFNKQ9P0W0 207 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 TCF20Q9UGU0 1960 aaKnown RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 PAPLNO95428 1278 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 LRG1P02750 347 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 CFHP08603 1231 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 SRGAP2BP0DMP2 458 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 BRD2P25440 801 aaKnown RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 USP8P40818 1118 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 CCR2P41597 374 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 UBASH3AP57075 661 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 POLR2FP61218 127 aaKnown RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 DRAP1Q14919 205 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 C4orf50Q6ZRC1 276 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 ZMIZ2Q8NF64 920 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 CMASQ8NFW8 434 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 SMOQ99835 787 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 MED10Q9BTT4 135 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 ZNF334Q9HCZ1 680 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-201ENST00000309641 PLCB1Q9NQ66 1216 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 KRT82Q9NSB4 513 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 CNTN6Q9UQ52 1028 aa9.66□□□□□ -0.86
PDE4D-201ENST00000309641 TULP2O00295 520 aa9.65□□□□□ -0.86
PDE4D-201ENST00000309641 CYP26A1O43174 497 aa9.65□□□□□ -0.86
PDE4D-201ENST00000309641 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms