RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 C4orf50Q6ZRC1 276 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 SEPT5Q99719 369 aaPredicted RBP23.54■■□□□ 1.36
SNUPN-201ENST00000308588 B3GNT5Q9BYG0 378 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 UBE2TQ9NPD8 197 aaPredicted RBP23.54■■□□□ 1.36
SNUPN-201ENST00000308588 IL9P15248 144 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 RAD23BP54727 409 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 CYP27A1Q02318 531 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 GJB7Q6PEY0 223 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 C12orf29Q8N999 325 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 RIPOR3Q96MK2 946 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 PIDD1Q9HB75 910 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 CEP72Q9P209 647 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 APEX2Q9UBZ4 518 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 C2orf16Q68DN1 1984 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 LGALS16A8MUM7 142 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 CLDN5O00501 218 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 XYLBO75191 536 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 BMP1P13497 986 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 ATF6P18850 670 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 MTHFRP42898 656 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 ALDH1A3P47895 512 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 YWHAEP62258 255 aaKnown RBP23.53■■□□□ 1.36
SNUPN-201ENST00000308588 CBX2Q14781 532 aaPredicted RBP23.53■■□□□ 1.36
SNUPN-201ENST00000308588 PAQR9Q6ZVX9 377 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 SLC4A11Q8NBS3 891 aa23.53■■□□□ 1.36
SNUPN-201ENST00000308588 C5orf42Q9H799 3197 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 BDNFP23560 247 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 MAGEA11P43364 429 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 GRASPQ7Z6J2 395 aaPredicted RBP23.52■■□□□ 1.36
SNUPN-201ENST00000308588 FUKQ8N0W3 1084 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 TMEM176AQ96HP8 235 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 ZNF518BQ9C0D4 1074 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 POMKQ9H5K3 350 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 HCFC1R1Q9NWW0 138 aa23.52■■□□□ 1.36
SNUPN-201ENST00000308588 DNMT3BQ9UBC3 853 aaKnown RBP23.52■■□□□ 1.36
SNUPN-201ENST00000308588 DOCK6Q96HP0 2047 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 CCDC130P13994 396 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 GPR15P49685 360 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 PLD1Q13393 1074 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 FKBP15Q5T1M5 1219 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 VSTM1Q6UX27 236 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 JAKMIP2Q96AA8 810 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 NECTIN4Q96NY8 510 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 WDR6Q9NNW5 1121 aaKnown RBP23.51■■□□□ 1.35
SNUPN-201ENST00000308588 FAM49BQ9NUQ9 324 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 FAM50BQ9Y247 325 aa23.51■■□□□ 1.35
SNUPN-201ENST00000308588 EPHB3P54753 998 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 NTHL1P78549 312 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 DDR2Q16832 855 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 TMEM270Q6UE05 265 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 ENOSF1Q7L5Y1 443 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 HEXIM2Q96MH2 286 aaKnown RBP23.5■■□□□ 1.35
SNUPN-201ENST00000308588 TMEM30AQ9NV96 361 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 AJAP1Q9UKB5 411 aaPredicted RBP23.5■■□□□ 1.35
SNUPN-201ENST00000308588 PCDHB4Q9Y5E5 795 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 PTPRDP23468 1912 aa23.5■■□□□ 1.35
SNUPN-201ENST00000308588 GOLGA6L19H0YKK7 550 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 RNF225M0QZC1 329 aaPredicted RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 KLK7P49862 253 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 CACNA2D1P54289 1103 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 MFAP3P55082 362 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 TPM4P67936 248 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 UBXN1Q04323 297 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 KLHDC7AQ5VTJ3 777 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 SDHAF4Q5VUM1 108 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 FAM35AQ86V20 835 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 ELMOD1Q8N336 334 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 SLC2A14Q8TDB8 520 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 GPR152Q8TDT2 470 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 GIPC2Q8TF65 315 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 CYFIP2Q96F07 1278 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 FAM81BQ96LP2 452 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 ZNF512Q96ME7 567 aaPredicted RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 LSM14BQ9BX40 385 aaKnown RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 CNTN6Q9UQ52 1028 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 SIK3Q9Y2K2 1263 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 PTPN2P17706 415 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 TRIM21P19474 475 aaKnown RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 RPL10AP62906 217 aaKnown RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 DNAJB7Q7Z6W7 309 aaPredicted RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 SCN4BQ8IWT1 228 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 PSMG2Q969U7 264 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 HNRNPABQ99729 332 aaKnown RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 CORO1BQ9BR76 489 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 MED10Q9BTT4 135 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 DNAI2Q9GZS0 605 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 PLCB1Q9NQ66 1216 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 RTN4Q9NQC3 1192 aaKnown RBP23.49■■□□□ 1.35
SNUPN-201ENST00000308588 DNAJC12Q9UKB3 198 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 ASB3Q9Y575 518 aa23.49■■□□□ 1.35
SNUPN-201ENST00000308588 NOTCH4Q99466 2003 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 TEX33O43247 280 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 RHOP08100 348 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 GRIK1P39086 918 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 ZNF132P52740 706 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 SYCP1Q15431 976 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 ARHGAP44Q17R89 818 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 PPP1R26Q5T8A7 1209 aaPredicted RBP23.48■■□□□ 1.35
SNUPN-201ENST00000308588 IQCEQ6IPM2 695 aa23.48■■□□□ 1.35
SNUPN-201ENST00000308588 HS6ST3Q8IZP7 471 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms