RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CST5P28325 142 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 MLH1P40692 756 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 TTC27Q6P3X3 843 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 JAMLQ86YT9 394 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 EMC1Q8N766 993 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 MAGOHBQ96A72 148 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 FAM114A2Q9NRY5 505 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 STRIP2Q9ULQ0 834 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 NOD1Q9Y239 953 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 FGFR1P11362 822 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 KRT3P12035 628 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 CHRNA3P32297 505 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 DHX34Q14147 1143 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 GOLGA7BQ2TAP0 167 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 TTMPQ5BVD1 217 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 XYLT1Q86Y38 959 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 CCDC50Q8IVM0 306 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 RHOT1Q8IXI2 618 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 GAD1Q99259 594 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 A8MXQ7 604 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 GOLGA8KD6RF30 607 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 TULP2O00295 520 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 LMO2P25791 158 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 VEGFBP49765 207 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 CDR1P51861 262 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 ACLYP53396 1101 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 RNF180Q86T96 592 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 ERP44Q9BS26 406 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 HEMGNQ9BXL5 484 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 METTL5Q9NRN9 209 aaKnown RBP23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 PADI3Q9ULW8 664 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.38
PDLIM2-202ENST00000308354 XPOTO43592 962 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 HSD17B3P37058 310 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 RGS7P49802 495 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 SIX1Q15475 284 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 DUPD1Q68J44 220 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 LCLAT1Q6UWP7 414 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 TTC39CQ8N584 583 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 FAM76AQ8TAV0 307 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 KBTBD7Q8WVZ9 684 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 ACSF2Q96CM8 615 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 FAM187AA6NFU0 413 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 PFKMP08237 780 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 CAPN2P17655 700 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 PTGIRP43119 386 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 TAF6P49848 677 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 UAP1Q16222 522 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 TXNRD3NBQ6F5E7 133 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 ANKS1BQ7Z6G8 1248 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 RNF169Q8NCN4 708 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 GSTCDQ8NEC7 633 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 PLAAQ9Y263 795 aa23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 PDCD11Q14690 1871 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-202ENST00000308354 PI4K2BG5E9Z4 385 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 MGEA5O60502 916 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 ZFYVE27Q5T4F4 411 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 SMYD5Q6GMV2 418 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 CCDC137Q6PK04 289 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 RNF25Q96BH1 459 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 ZNF560Q96MR9 790 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 PPP1R10Q96QC0 940 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 CFHR5Q9BXR6 569 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 MIOSQ9NXC5 875 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 PCYOX1Q9UHG3 505 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 MTUS1Q9ULD2 1270 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 SIGLEC16A6NMB1 481 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 GPR182O15218 404 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 PSTPIP1O43586 416 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 MAN1A1P33908 653 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 KCNJ1P48048 391 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 LILRA4P59901 499 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 RPAINQ86UA6 219 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 TTC30AQ86WT1 665 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 C1orf54Q8WWF1 131 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 LRRC45Q96CN5 670 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 PLVAPQ9BX97 442 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 KIAA1257Q9ULG3 409 aa23.68■■□□□ 1.38
PDLIM2-202ENST00000308354 E5RJQ4 531 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 INHAP05111 366 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 RALAP11233 206 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 PIWIL1Q96J94 861 aaKnown RBP23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 FSCN2O14926 492 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 PSMA2P25787 234 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 GNL1P36915 607 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 TAP1Q03518 808 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 CYP1B1Q16678 543 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 TMC3Q7Z5M5 1100 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 APPL2Q8NEU8 664 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 ATG4AQ8WYN0 398 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 FAM124BQ9H5Z6 455 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 CHST12Q9NRB3 414 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 RASAL2Q9UJF2 1139 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 SNX24Q9Y343 169 aa23.67■■□□□ 1.38
PDLIM2-202ENST00000308354 CCDC130P13994 396 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 SNX1Q13596 522 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 LPIN1Q14693 890 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 KCTD16Q68DU8 428 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms