RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 WASF1Q92558 559 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 CAMK1GQ96NX5 476 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 MAGED2Q9UNF1 606 aaPredicted RBP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 PCDHB9Q9Y5E1 797 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
SMIM4-201ENST00000307106 TTC26A0AVF1 554 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 BTBD18B2RXH4 712 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 PPEF2O14830 753 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 SLC16A4O15374 487 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 XPOTO43592 962 aaKnown RBP12.8□□□□□ -0.36
SMIM4-201ENST00000307106 SERPINF2P08697 491 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 FTH1P19P0C7X4 201 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
SMIM4-201ENST00000307106 OPRD1P41143 372 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 MRPS21P82921 87 aaKnown RBP12.8□□□□□ -0.36
SMIM4-201ENST00000307106 PPP2R3AQ06190 1150 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 STRN3Q13033 797 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 USP4Q13107 963 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 ECM1Q16610 540 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 EFCAB13Q8IY85 973 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 DAW1Q8N136 415 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 STKLD1Q8NE28 680 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 CAPN10Q9HC96 672 aa12.8□□□□□ -0.36
SMIM4-201ENST00000307106 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
SMIM4-201ENST00000307106 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMIM4-201ENST00000307106 CLDN3O15551 220 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 SH3BP5O60239 455 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 HIP1RO75146 1068 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 CYP11A1P05108 521 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 CKMP06732 381 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 CCT6AP40227 531 aaKnown RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 MATR3P43243 847 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 BYSLQ13895 437 aaKnown RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 LRRTM3Q86VH5 581 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 TXNDC5Q8NBS9 432 aaKnown RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 DRC1Q96MC2 740 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 TRPC7Q9HCX4 862 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 POLMQ9NP87 494 aaPredicted RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 DNAAF2Q9NVR5 837 aaKnown RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 KIAA1024Q9UPX6 916 aa12.79□□□□□ -0.36
SMIM4-201ENST00000307106 MUC22E2RYF6 1773 aaPredicted RBP12.79□□□□□ -0.36
SMIM4-201ENST00000307106 TRAV19A0A0A6YYK7 116 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 SGK1O00141 431 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 AP5Z1O43299 807 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 TADA3O75528 432 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 NFATC1O95644 943 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 PRB1P04280 392 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 CLTAP09496 248 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 USP17L7P0C7H9 530 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 CSH1P0DML2 217 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 CSH2P0DML3 217 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 TNFSF9P41273 254 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 GPR15P49685 360 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 MCL1Q07820 350 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 ZPBP2Q6X784 338 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 DEFB119Q8N690 84 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 HMGB4Q8WW32 186 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 TMEM206Q9H813 350 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 C17orf75Q9HAS0 396 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 DSEQ9UL01 958 aa12.78□□□□□ -0.36
SMIM4-201ENST00000307106 LACTBL1A8MY62 500 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 SYPP08247 313 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 PAX3P23760 479 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 TIE1P35590 1138 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 IRX6P78412 446 aaPredicted RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 RPL6Q02878 288 aaKnown RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 MAPK7Q13164 816 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 SLC14A1Q13336 389 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 NBR1Q14596 966 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 EOGTQ5NDL2 527 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 SPATA1Q5VX52 437 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 C9orf57Q5W0N0 161 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 IL17RCQ8NAC3 791 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 SH3RF2Q8TEC5 729 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 CRELD1Q96HD1 420 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 UBL7Q96S82 380 aaPredicted RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
SMIM4-201ENST00000307106 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 UXTQ9UBK9 157 aaPredicted RBP12.77□□□□□ -0.37
SMIM4-201ENST00000307106 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms