RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 LEMD2Q8NC56 503 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PCED1BQ96HM7 432 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PKMYT1Q99640 499 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CORO1BQ9BR76 489 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ELOVL4Q9GZR5 314 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CRTAC1Q9NQ79 661 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CISHQ9NSE2 258 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ASB3Q9Y575 518 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ANAPC1Q9H1A4 1944 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZNF197O14709 1029 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SOAT2O75908 522 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CSH1P0DML2 217 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CSH2P0DML3 217 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 BDNFP23560 247 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CYP2F1P24903 491 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GRIK1P39086 918 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MAGEA11P43364 429 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZNF165P49910 485 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZP2Q05996 745 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ORC1Q13415 861 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CDKAL1Q5VV42 579 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TATDN2Q93075 761 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ARID3AQ99856 593 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CRACR2AQ9BSW2 395 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FAM49BQ9NUQ9 324 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FANCLQ9NW38 375 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TAB2Q9NYJ8 693 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 DNMT3BQ9UBC3 853 aaKnown RBP11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HMGXB4Q9UGU5 601 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 USTQ9Y2C2 406 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NME7Q9Y5B8 376 aa11.7□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PRUNE2Q8WUY3 3088 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HELZP42694 1942 aaKnown RBP11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FGF19O95750 216 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CAVIN2O95810 425 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MYL4P12829 197 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ATF6P18850 670 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NTHL1P78549 312 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GCNT1Q02742 428 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 KRT31Q15323 416 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ENOSF1Q7L5Y1 443 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FAM35AQ86V20 835 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GIPC2Q8TF65 315 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TMEM176AQ96HP8 235 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 EHD2Q9NZN4 543 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CEP72Q9P209 647 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 UXTQ9UBK9 157 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PCDHB4Q9Y5E5 795 aa11.69□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MYO10Q9HD67 2058 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 C2CD4DB7Z1M9 353 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CLDN5O00501 218 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 AP1G2O75843 785 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CCDC130P13994 396 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ADORA2BP29275 332 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CDC25CP30307 473 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GPR15P49685 360 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MFAP3P55082 362 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 DDR2Q16832 855 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MIIPQ5JXC2 388 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TRIM65Q6PJ69 517 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 DNAJB7Q7Z6W7 309 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ARHGEF19Q8IW93 802 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GJD3Q8N144 294 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CRYBG2Q8N1P7 616 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LMO3Q8TAP4 145 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLC2A14Q8TDB8 520 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ING5Q8WYH8 240 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CEP295NLQ96MC4 621 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NECAB3Q96P71 396 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms