RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PDE12Q6L8Q7 609 aaKnown RBP28.81■■■□□ 2.2
HDAC3-201ENST00000305264 PAQR9Q6ZVX9 377 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 EMILIN2Q9BXX0 1053 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 HAUS4Q9H6D7 363 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 KIAA1257Q9ULG3 409 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 PLEKP08567 350 aaPredicted RBP28.81■■■□□ 2.2
HDAC3-201ENST00000305264 CCDC172P0C7W6 258 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 ADORA2BP29275 332 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 KLHL30Q0D2K2 578 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 MAPRE1Q15691 268 aaKnown RBP28.81■■■□□ 2.2
HDAC3-201ENST00000305264 ARHGAP17Q68EM7 881 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 ADGRD2Q7Z7M1 963 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 ZNF518BQ9C0D4 1074 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.81■■■□□ 2.2
HDAC3-201ENST00000305264 MYH10P35580 1976 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 MTMR11A4FU01 709 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 RAB33AQ14088 237 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 MEA1Q16626 185 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 PALB2Q86YC2 1186 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 MRPL38Q96DV4 380 aaKnown RBP28.8■■■□□ 2.2
HDAC3-201ENST00000305264 ABI2Q9NYB9 513 aaPredicted RBP28.8■■■□□ 2.2
HDAC3-201ENST00000305264 TSPAN16Q9UKR8 245 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 REV3LO60673 3130 aa28.8■■■□□ 2.2
HDAC3-201ENST00000305264 ADH1AP07327 375 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 NFE2Q16621 373 aaPredicted RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 TSR1Q2NL82 804 aaKnown RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 GOLGA7BQ2TAP0 167 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 TDRD12Q587J7 1177 aaKnown RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 ZNF697Q5TEC3 545 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 FAM35AQ86V20 835 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 ATAD1Q8NBU5 361 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 OLIG1Q8TAK6 271 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 PANX2Q96RD6 677 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 HNRNPABQ99729 332 aaKnown RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 MED10Q9BTT4 135 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 ARHGAP20Q9P2F6 1191 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 SERPING1P05155 500 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 MMEP08473 750 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 CHRNB2P17787 502 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 GSDMDP57764 484 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 PTPROQ16827 1216 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 ZNF571Q7Z3V5 609 aaPredicted RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 SPATA2LQ8IUW3 424 aaPredicted RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 TTC9BQ8N6N2 239 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 FAM161BQ96MY7 647 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 SYT11Q9BT88 431 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 CRISPLD1Q9H336 500 aa28.79■■■□□ 2.2
HDAC3-201ENST00000305264 ZNHIT6Q9NWK9 470 aaKnown RBP28.79■■■□□ 2.2
HDAC3-201ENST00000305264 ABLIM3O94929 683 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 KLRC2P26717 231 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 CNGA2Q16280 664 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 C4orf50Q6ZRC1 276 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 ZNF461Q8TAF7 563 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 KRT82Q9NSB4 513 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 TMEM30AQ9NV96 361 aa28.78■■■□□ 2.2
HDAC3-201ENST00000305264 MICAL2O94851 1124 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 BDNFP23560 247 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 CACNA2D1P54289 1103 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 FMO1Q01740 532 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 CDR2Q01850 454 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 ADCY1Q08828 1119 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 LCLAT1Q6UWP7 414 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 TTC30AQ86WT1 665 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 CHP1Q99653 195 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 PCDHB5Q9Y5E4 795 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 PER2O15055 1255 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 MED7O43513 233 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 TGM5O43548 720 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 CFAP221Q4G0U5 840 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 RBM23Q86U06 439 aaKnown RBP28.77■■■□□ 2.2
HDAC3-201ENST00000305264 PASD1Q8IV76 773 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 AGPAT1Q99943 283 aa28.77■■■□□ 2.2
HDAC3-201ENST00000305264 AFF4Q9UHB7 1163 aaKnown RBP28.77■■■□□ 2.2
HDAC3-201ENST00000305264 M0QYV0 167 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 CYP2F1P24903 491 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 CCDC173Q0VFZ6 552 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 SMARCB1Q12824 385 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 STILQ15468 1287 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 HABP4Q5JVS0 413 aaKnown RBP28.76■■■□□ 2.19
HDAC3-201ENST00000305264 TPGS2Q68CL5 300 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 ZNF677Q86XU0 584 aa28.76■■■□□ 2.19
HDAC3-201ENST00000305264 PRRC2BQ5JSZ5 2229 aaKnown RBP28.76■■■□□ 2.19
HDAC3-201ENST00000305264 CLASP2O75122 1294 aaKnown RBP28.75■■■□□ 2.19
HDAC3-201ENST00000305264 DENND1BQ6P3S1 775 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 FUBP3Q96I24 572 aaKnown RBP eCLIP28.75■■■□□ 2.19
HDAC3-201ENST00000305264 PCDHGC3Q9UN70 934 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 SLC27A5Q9Y2P5 690 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 BZW2Q9Y6E2 419 aaKnown RBP28.75■■■□□ 2.19
HDAC3-201ENST00000305264 SPATA31D3P0C874 917 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 ATF2P15336 505 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 CLCN4P51793 760 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 DUSP4Q13115 394 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 SPATA31D4Q6ZUB0 917 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 UBA3Q8TBC4 463 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 SPPL2BQ8TCT7 592 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 C2orf15Q8WU43 125 aaKnown RBP28.75■■■□□ 2.19
HDAC3-201ENST00000305264 SMARCD1Q96GM5 515 aa28.75■■■□□ 2.19
HDAC3-201ENST00000305264 FAM170AA1A519 330 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 AP1G2O75843 785 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 BEST1O76090 585 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms