RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SARM1Q6SZW1 724 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 RTL10Q7L3V2 364 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 TTC9BQ8N6N2 239 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 SEPT5Q99719 369 aaPredicted RBP26.02■■□□□ 1.76
HOXC9-201ENST00000303450 B3GNT5Q9BYG0 378 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 CRISPLD1Q9H336 500 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 FOXN3O00409 490 aaPredicted RBP26.01■■□□□ 1.75
HOXC9-201ENST00000303450 ATP8B3O60423 1300 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 TBX10O75333 385 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 ZMYND10O75800 440 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 CCDC130P13994 396 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 CD19P15391 556 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 CYP2F1P24903 491 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 LTBRP36941 435 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 DLX2Q07687 328 aaPredicted RBP26.01■■□□□ 1.75
HOXC9-201ENST00000303450 SLC2A14Q8TDB8 520 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 CYFIP2Q96F07 1278 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 SPAG5Q96R06 1193 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 TRIM5Q9C035 493 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 SFXN1Q9H9B4 322 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 CLEC1BQ9P126 229 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 INSL5Q9Y5Q6 135 aa26.01■■□□□ 1.75
HOXC9-201ENST00000303450 CLDN5O00501 218 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 RFPL2O75678 378 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 HOXB8P17481 243 aaPredicted RBP26■■□□□ 1.75
HOXC9-201ENST00000303450 BDNFP23560 247 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 PBX1P40424 430 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 ZNF132P52740 706 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 SMYD5Q6GMV2 418 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 CACNA2D4Q7Z3S7 1137 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 HLA-CQ95604 372 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 RHOBTB2Q9BYZ6 727 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 UBE2ZQ9H832 354 aaPredicted RBP26■■□□□ 1.75
HOXC9-201ENST00000303450 ZDHHC7Q9NXF8 308 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 CEP72Q9P209 647 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 KIAA1257Q9ULG3 409 aa26■■□□□ 1.75
HOXC9-201ENST00000303450 LRG1P02750 347 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 HAPLN1P10915 354 aaPredicted RBP25.99■■□□□ 1.75
HOXC9-201ENST00000303450 ALDH1A3P47895 512 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 SGO2Q562F6 1265 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 FUKQ8N0W3 1084 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 C12orf76Q8N812 135 aaPredicted RBP25.99■■□□□ 1.75
HOXC9-201ENST00000303450 ZNF518BQ9C0D4 1074 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 GPR88Q9GZN0 384 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 YIPF1Q9Y548 306 aa25.99■■□□□ 1.75
HOXC9-201ENST00000303450 F8VZ95 297 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 SOAT2O75908 522 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 PNMA6AP0CW24 399 aaPredicted RBP25.98■■□□□ 1.75
HOXC9-201ENST00000303450 VDRP11473 427 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 ADORA2BP29275 332 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 PPP1R26Q5T8A7 1209 aaPredicted RBP25.98■■□□□ 1.75
HOXC9-201ENST00000303450 VSTM1Q6UX27 236 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 FAM35AQ86V20 835 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 FAM71AQ8IYT1 594 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 HNRNPABQ99729 332 aaKnown RBP25.98■■□□□ 1.75
HOXC9-201ENST00000303450 NUP58Q9BVL2 599 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 EYSQ5T1H1 3165 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 PTPRDP23468 1912 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.98■■□□□ 1.75
HOXC9-201ENST00000303450 CCDC195A0A1B0GUA6 201 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 CYP26A1O43174 497 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 AP5Z1O43299 807 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 HNRNPA1P09651 372 aaKnown RBP eCLIP25.98■■□□□ 1.75
HOXC9-201ENST00000303450 KCNA5P22460 613 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 HOXA9P31269 272 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 GRIK1P39086 918 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 MAGEA11P43364 429 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 TWF1Q12792 350 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 PLD1Q13393 1074 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 RARS2Q5T160 578 aaKnown RBP25.98■■□□□ 1.75
HOXC9-201ENST00000303450 SYCE2Q6PIF2 218 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 TMC5Q6UXY8 1006 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 PAQR9Q6ZVX9 377 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 SCN4BQ8IWT1 228 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 SMARCD1Q96GM5 515 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 APOL5Q9BWW9 433 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 COG5Q9UP83 839 aa25.98■■□□□ 1.75
HOXC9-201ENST00000303450 JAM2P57087 298 aa25.97■■□□□ 1.75
HOXC9-201ENST00000303450 RPL10AP62906 217 aaKnown RBP25.97■■□□□ 1.75
HOXC9-201ENST00000303450 ARHGAP17Q68EM7 881 aa25.97■■□□□ 1.75
HOXC9-201ENST00000303450 CMASQ8NFW8 434 aaPredicted RBP25.97■■□□□ 1.75
HOXC9-201ENST00000303450 MSLNLQ96KJ4 702 aa25.97■■□□□ 1.75
HOXC9-201ENST00000303450 KRT82Q9NSB4 513 aa25.97■■□□□ 1.75
HOXC9-201ENST00000303450 MYH10P35580 1976 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 H3BQ06 376 aaPredicted RBP25.96■■□□□ 1.75
HOXC9-201ENST00000303450 CCL16O15467 120 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 XYLBO75191 536 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 AP1G2O75843 785 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 CALCAP01258 141 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 GNA15P30679 374 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 STAT1P42224 750 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 EPHB3P54753 998 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 PTK2Q05397 1052 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 CLUL1Q15846 466 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 DDR2Q16832 855 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 ELMOD1Q8N336 334 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 PRKD2Q9BZL6 878 aa25.96■■□□□ 1.75
HOXC9-201ENST00000303450 TRIM66O15016 1216 aa25.95■■□□□ 1.74
HOXC9-201ENST00000303450 FAM200BP0CF97 657 aa25.95■■□□□ 1.74
HOXC9-201ENST00000303450 BRD2P25440 801 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms