RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NEU2Q9Y3R4 380 aa20.48■□□□□ 0.87
HOXC4-201ENST00000303406 GOLGA8SH3BPF8 625 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 ALDH1A1P00352 501 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 CTGFP29279 349 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 LMAN1P49257 510 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 ZNF200P98182 395 aaPredicted RBP20.47■□□□□ 0.87
HOXC4-201ENST00000303406 SLC25A11Q02978 314 aaKnown RBP20.47■□□□□ 0.87
HOXC4-201ENST00000303406 ORC1Q13415 861 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 TRIP11Q15643 1979 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 TAZQ16635 292 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 CEP85LQ5SZL2 805 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 AGBL2Q5U5Z8 902 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 LIMS2Q7Z4I7 341 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 CROCCP2Q86T23 111 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 JOSD2Q8TAC2 188 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 ATP6V1G3Q96LB4 118 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 PABPC3Q9H361 631 aaKnown RBP20.47■□□□□ 0.87
HOXC4-201ENST00000303406 METTL5Q9NRN9 209 aaKnown RBP20.47■□□□□ 0.87
HOXC4-201ENST00000303406 DRG1Q9Y295 367 aaKnown RBP20.47■□□□□ 0.87
HOXC4-201ENST00000303406 SNX9Q9Y5X1 595 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 SCN10AQ9Y5Y9 1956 aa20.47■□□□□ 0.87
HOXC4-201ENST00000303406 hCG_1818297A0A087WSY0 165 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 SHOX2O60902 331 aaPredicted RBP20.46■□□□□ 0.87
HOXC4-201ENST00000303406 LRCH4O75427 683 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 KRT14P02533 472 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 MYZAPP0CAP1 466 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 PCK1P35558 622 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 PMS2P54278 862 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 MRPS6P82932 125 aaKnown RBP20.46■□□□□ 0.87
HOXC4-201ENST00000303406 ZNF844Q08AG5 666 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 ODF2Q5BJF6 829 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 TFDP3Q5H9I0 405 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 RHBDF2Q6PJF5 856 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 MFSD7Q6UXD7 560 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 RPAINQ86UA6 219 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 CCDC89Q8N998 374 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 RNF25Q96BH1 459 aaPredicted RBP20.46■□□□□ 0.87
HOXC4-201ENST00000303406 SNF8Q96H20 258 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 MRPL45Q9BRJ2 306 aaKnown RBP20.46■□□□□ 0.87
HOXC4-201ENST00000303406 HEMGNQ9BXL5 484 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 SPC25Q9HBM1 224 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 TJP2Q9UDY2 1190 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 GTF2IRD1Q9UHL9 959 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 R3HDM2Q9Y2K5 976 aaKnown RBP20.46■□□□□ 0.87
HOXC4-201ENST00000303406 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 TRPV2Q9Y5S1 764 aa20.46■□□□□ 0.87
HOXC4-201ENST00000303406 PPEF2O14830 753 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 RPS6KA5O75582 802 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 ECM2O94769 699 aaPredicted RBP20.45■□□□□ 0.86
HOXC4-201ENST00000303406 PFKMP08237 780 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 RARGP13631 454 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 GJC1P36383 396 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 CDKN2BP42772 138 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 GOLGA7BQ2TAP0 167 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 FBXO47Q5MNV8 452 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 ZDHHC17Q8IUH5 632 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 C18orf25Q96B23 403 aaPredicted RBP20.45■□□□□ 0.86
HOXC4-201ENST00000303406 NCAPGQ9BPX3 1015 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 SLC4A5Q9BY07 1137 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 CXCL16Q9H2A7 254 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 CYLDQ9NQC7 956 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 ASNSD1Q9NWL6 643 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 ATP8A1Q9Y2Q0 1164 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 HES2Q9Y543 173 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 IPPQ9Y573 584 aa20.45■□□□□ 0.86
HOXC4-201ENST00000303406 TRIP12Q14669 1992 aaPredicted RBP20.45■□□□□ 0.86
HOXC4-201ENST00000303406 M0QZ92 97 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 DPYSL4O14531 572 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 NDC80O14777 642 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 C6orf222P0C671 652 aaPredicted RBP20.44■□□□□ 0.86
HOXC4-201ENST00000303406 TCF4P15884 667 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 IVDP26440 423 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 LRPAP1P30533 357 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 ZNF143P52747 638 aaPredicted RBP20.44■□□□□ 0.86
HOXC4-201ENST00000303406 SNX1Q13596 522 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 SV2CQ496J9 727 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 ATP13A4Q4VNC1 1196 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 KDM7AQ6ZMT4 941 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 ANKS1BQ7Z6G8 1248 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 SESTD1Q86VW0 696 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 FAM228AQ86W67 206 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 CRYBG2Q8N1P7 616 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 ATG4AQ8WYN0 398 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 FOXP3Q9BZS1 431 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 CHST12Q9NRB3 414 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 ASIC3Q9UHC3 531 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 SCN1AP35498 2009 aa20.44■□□□□ 0.86
HOXC4-201ENST00000303406 CASP8AP2Q9UKL3 1982 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 C3orf70A6NLC5 250 aaPredicted RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 LIASO43766 372 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 RNF8O76064 485 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 ATF2P15336 505 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 GPD1P21695 349 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 AKAP5P24588 427 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 SCNN1AP37088 669 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 TAF6P49848 677 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 FAM102AQ5T9C2 384 aaPredicted RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 CEP128Q6ZU80 1094 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms