RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 DCUN1D2Q6PH85 259 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 C12orf50Q8NA57 414 aaPredicted RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 ARRDC4Q8NCT1 418 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 STK32AQ8WU08 396 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 GLT1D1Q96MS3 346 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 GDF15Q99988 308 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 AP1M1Q9BXS5 423 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 TRIM7Q9C029 511 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 HMX1Q9NP08 348 aaPredicted RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 UBN1Q9NPG3 1134 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 KLK14Q9P0G3 267 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 CYTH4Q9UIA0 394 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 M0QYV0 167 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 INHAP05111 366 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 GLI1P08151 1106 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 CTSHP09668 335 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 CETN2P41208 172 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 EPHB4P54760 987 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 PSMC1P62191 440 aaKnown RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 SLC7A5Q01650 507 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 SOX4Q06945 474 aaPredicted RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 PDCLQ13371 301 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 LPIN1Q14693 890 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 LHX8Q68G74 356 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 CPNE8Q86YQ8 564 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
TPM3-202ENST00000302206 EXD1Q8NHP7 514 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 KBTBD7Q8WVZ9 684 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 SEC14L1Q92503 715 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 CAVIN3Q969G5 261 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 MCEEQ96PE7 176 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 CPXM1Q96SM3 734 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 DDX47Q9H0S4 455 aaKnown RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 AGO3Q9H9G7 860 aaKnown RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 CYLDQ9NQC7 956 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 DDX56Q9NY93 547 aaKnown RBP12.67□□□□□ -0.38
TPM3-202ENST00000302206 PCYOX1Q9UHG3 505 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 TSPAN16Q9UKR8 245 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 PADI3Q9ULW8 664 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 SCN1AP35498 2009 aa12.67□□□□□ -0.38
TPM3-202ENST00000302206 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 SPTLC1O15269 473 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 HUS1O60921 280 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 SASH3O75995 380 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 ERBB2P04626 1255 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 THP07101 528 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 PFKMP08237 780 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 KRT3P12035 628 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 PTPN7P35236 360 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
TPM3-202ENST00000302206 SCNN1AP37088 669 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 FNTAP49354 379 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 LILRA4P59901 499 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 COPS2P61201 443 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 RPL7AP62424 266 aaKnown RBP12.66□□□□□ -0.38
TPM3-202ENST00000302206 GUCY2DQ02846 1103 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 ORC1Q13415 861 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 CASP8Q14790 479 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
TPM3-202ENST00000302206 GOLGA7BQ2TAP0 167 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 POLNQ7Z5Q5 900 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 NECAB2Q7Z6G3 386 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 PRELID2Q8N945 189 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 APPL2Q8NEU8 664 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 PAWRQ96IZ0 340 aaKnown RBP12.66□□□□□ -0.38
TPM3-202ENST00000302206 RBM41Q96IZ5 413 aaKnown RBP12.66□□□□□ -0.38
TPM3-202ENST00000302206 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 DEFB118Q96PH6 123 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 SYNCQ9H7C4 482 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 EPB41L5Q9HCM4 733 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 HOMER3Q9NSC5 361 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 HESX1Q9UBX0 185 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 FRMPD3Q5JV73 1810 aa12.66□□□□□ -0.38
TPM3-202ENST00000302206 A8MXQ7 604 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 INPPL1O15357 1258 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 ZMYND10O75800 440 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 MYBL2P10244 700 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 CD52P31358 61 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 GBP1P32455 592 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms