RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GLT1D1Q96MS3 346 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 TRAIPQ9BWF2 469 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 TSPYL2Q9H2G4 693 aaPredicted RBP23.52■■□□□ 1.36
SMAD1-201ENST00000302085 SNX25Q9H3E2 840 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 HMX1Q9NP08 348 aaPredicted RBP23.52■■□□□ 1.36
SMAD1-201ENST00000302085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMAD1-201ENST00000302085 CACNG4Q9UBN1 327 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 MTUS1Q9ULD2 1270 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 GIT1Q9Y2X7 761 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 A0A0U1RQG5 324 aaPredicted RBP23.52■■□□□ 1.36
SMAD1-201ENST00000302085 ARL5CA6NH57 179 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 ZNF623O75123 536 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 CHRNA3P32297 505 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 PTGIRP43119 386 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 DDX42Q86XP3 938 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMAD1-201ENST00000302085 SLAIN1Q8ND83 568 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 TRPV6Q9H1D0 765 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 ST7Q9NRC1 585 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 METTL5Q9NRN9 209 aaKnown RBP23.52■■□□□ 1.36
SMAD1-201ENST00000302085 SLC38A7Q9NVC3 462 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 TULP2O00295 520 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 HUS1O60921 280 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 THP07101 528 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 FAM153BP0C7A2 387 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 GJC1P36383 396 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 DR1Q01658 176 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 FAM153CQ494X1 144 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 LRRC38Q5VT99 294 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 PMF1Q6P1K2 205 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 EMBQ6PCB8 327 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 ANKS1BQ7Z6G8 1248 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 EXD1Q8NHP7 514 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 SEC14L1Q92503 715 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 TRIM51Q9BSJ1 452 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 FAM153AQ9UHL3 310 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 PSMA2P25787 234 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 GRK4P32298 578 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 OSTM1Q86WC4 334 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 TOP6BLQ8N6T0 577 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 ARFGAP1Q8N6T3 406 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 EMC1Q8N766 993 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 FNIP1Q8TF40 1166 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 SLC35F5Q8WV83 523 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 CAVIN3Q969G5 261 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 PCYOX1Q9UHG3 505 aa23.51■■□□□ 1.35
SMAD1-201ENST00000302085 E5RJQ4 531 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 PIK3R2O00459 728 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 GABBR2O75899 941 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 WARSP23381 471 aaKnown RBP23.5■■□□□ 1.35
SMAD1-201ENST00000302085 RGS7P49802 495 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 DHX34Q14147 1143 aaKnown RBP23.5■■□□□ 1.35
SMAD1-201ENST00000302085 TXNRD3NBQ6F5E7 133 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 ADGRF2Q8IZF7 708 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 EIF1ADQ8N9N8 165 aaKnown RBP23.5■■□□□ 1.35
SMAD1-201ENST00000302085 SLC43A3Q8NBI5 491 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 ZNF784Q8NCA9 323 aaPredicted RBP23.5■■□□□ 1.35
SMAD1-201ENST00000302085 IPO4Q8TEX9 1081 aaKnown RBP23.5■■□□□ 1.35
SMAD1-201ENST00000302085 ADAM2Q99965 735 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 SLC4A5Q9BY07 1137 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 VIPAS39Q9H9C1 493 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 HPCAL4Q9UM19 191 aa23.5■■□□□ 1.35
SMAD1-201ENST00000302085 A0A0U1RQF3 1178 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 A0A1W2PQ45 241 aaPredicted RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 A0A1W2PQY0 241 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 FAM187AA6NFU0 413 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CYB561D2O14569 222 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 RALAP11233 206 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 ECHS1P30084 290 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 COILP38432 576 aaPredicted RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 SCNN1GP51170 649 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CUL1Q13616 776 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 SMC1AQ14683 1233 aaKnown RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 TRAF7Q6Q0C0 670 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 C12orf50Q8NA57 414 aaPredicted RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 HESX1Q9UBX0 185 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 DAPK3O43293 454 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 SETSIPP0DME0 302 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CKBP12277 381 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CCDC130P13994 396 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CENPFP49454 3210 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 RAB27AP51159 221 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 PDE4CQ08493 712 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 ARHGEF6Q15052 776 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 OR6B2Q6IFH4 312 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CCDC137Q6PK04 289 aaKnown RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 FAM183BPQ6ZVS7 135 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 JAMLQ86YT9 394 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 CCDC50Q8IVM0 306 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 RCOR2Q8IZ40 523 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 RNF25Q96BH1 459 aaPredicted RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 ZBTB9Q96C00 473 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 HEMGNQ9BXL5 484 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 LRRC19Q9H756 370 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 KLHL11Q9NVR0 708 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 UTP11Q9Y3A2 253 aaKnown RBP23.49■■□□□ 1.35
SMAD1-201ENST00000302085 SQORQ9Y6N5 450 aa23.49■■□□□ 1.35
SMAD1-201ENST00000302085 FAM163BP0C2L3 166 aa23.48■■□□□ 1.35
SMAD1-201ENST00000302085 FAM102AQ5T9C2 384 aaPredicted RBP23.48■■□□□ 1.35
SMAD1-201ENST00000302085 TMEM110Q86TL2 294 aa23.48■■□□□ 1.35
SMAD1-201ENST00000302085 RNF169Q8NCN4 708 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms