RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CAVIN3Q969G5 261 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 GANQ9H2C0 597 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 RGS18Q9NS28 235 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
GCN1-201ENST00000300648 ALKQ9UM73 1620 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 ASB14A6NK59 587 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 CD3EAPO15446 510 aaKnown RBP11.72□□□□□ -0.53
GCN1-201ENST00000300648 GTF2H1P32780 548 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 TBC1D10BQ4KMP7 808 aaPredicted RBP11.72□□□□□ -0.53
GCN1-201ENST00000300648 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 PMF1Q6P1K2 205 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 CAAP1Q9H8G2 361 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 KAT6AQ92794 2004 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 NCAM2O15394 837 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 RBP1P09455 135 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 RFC5P40937 340 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 DPYDQ12882 1025 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 WEE2P0C1S8 567 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 PDK2Q15119 407 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 DDR2Q16832 855 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 PPP4R4Q6NUP7 873 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 EIF2AK1Q9BQI3 630 aaKnown RBP11.72□□□□□ -0.53
GCN1-201ENST00000300648 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 RBM12Q9NTZ6 932 aaKnown RBP11.72□□□□□ -0.53
GCN1-201ENST00000300648 KLHL20Q9Y2M5 609 aa11.72□□□□□ -0.53
GCN1-201ENST00000300648 E9PCH4 1651 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CASZ1Q86V15 1759 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 A0A0A6YYK5 440 aaPredicted RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 H7C1W4 665 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 RARGP13631 454 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 PCSK1P29120 753 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 UBE2SQ16763 222 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 ERO1BQ86YB8 467 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 UBTFL6P0CB48 400 aaPredicted RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 CDC25AP30304 524 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 LRRC36Q1X8D7 754 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 HAUS6Q7Z4H7 955 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CHAMP1Q96JM3 812 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 COMMD8Q9NX08 183 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 MAPRE3Q9UPY8 281 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 DRG1Q9Y295 367 aaKnown RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 GDF11O95390 407 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 PGK2P07205 417 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 ARID5BQ14865 1188 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CHI3L2Q15782 390 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 USP39Q53GS9 565 aaKnown RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 EFHC1Q5JVL4 640 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 MRNIPQ6NTE8 343 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 MOSPD2Q8NHP6 518 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 ACTRT1Q8TDG2 376 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 NFKBIL1Q9UBC1 381 aaPredicted RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 AAR2Q9Y312 384 aaKnown RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 DPYSL4O14531 572 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 MAGEB2O15479 319 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■■□□ 15.5
GCN1-201ENST00000300648 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CAPN1P07384 714 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 HSD17B3P37058 310 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 NAB1Q13506 487 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 EPHA7Q15375 998 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CCDC153Q494R4 210 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 PDZK1Q5T2W1 519 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CDC73Q6P1J9 531 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 SPRTNQ9H040 489 aaPredicted RBP11.71□□□□□ -0.53
GCN1-201ENST00000300648 GGA2Q9UJY4 613 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 CLCA2Q9UQC9 943 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 SLC30A1Q9Y6M5 507 aa11.71□□□□□ -0.53
GCN1-201ENST00000300648 ATXN2Q99700 1313 aaKnown RBP11.71□□□□□ -0.54
GCN1-201ENST00000300648 ANXA6P08133 673 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 ZNF23P17027 643 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 RXRBP28702 533 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 SLC16A2P36021 539 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 PNPLA4P41247 253 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 GALCP54803 685 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 NME3Q13232 169 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 EIF1ADQ8N9N8 165 aaKnown RBP11.71□□□□□ -0.54
GCN1-201ENST00000300648 RDM1Q8NG50 284 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 VWA5AO00534 786 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 ZNF862O60290 1169 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 ATP6V1B1P15313 513 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 WARSP23381 471 aaKnown RBP11.71□□□□□ -0.54
GCN1-201ENST00000300648 SLC20A2Q08357 652 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 COX10Q12887 443 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 C16orf62Q7Z3J2 963 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 ASB2Q96Q27 587 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 KATNAL1Q9BW62 490 aa11.71□□□□□ -0.54
GCN1-201ENST00000300648 LRRC7Q96NW7 1537 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms