RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 SF3B1O75533 1304 aaKnown RBP eCLIP7.44□□□□□ -1.22
RAG1-201ENST00000299440 RHOBTB1O94844 696 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 MAP3K6O95382 1288 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CREMQ03060 361 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CTU1Q7Z7A3 348 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 ANKRD23Q86SG2 305 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 USP13Q92995 863 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM136AQ96C01 138 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 HES6Q96HZ4 224 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FMO2Q99518 471 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 PACSIN2Q9UNF0 486 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 NRCAMQ92823 1304 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 TMEM150BA6NC51 233 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 C2orf81A6NN90 581 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM47E-STBD1D6RA91 191 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ARSEP51690 589 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 SLC9A5Q14940 896 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 OTUB1Q96FW1 271 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 CDK5RAP1Q96SZ6 601 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM129AQ9BZQ8 928 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 SPASTQ9UBP0 616 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM205AQ6ZU69 1335 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CDC42BPBQ9Y5S2 1711 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 MOXD2PA6NHM9 499 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ATMINO43313 823 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 GNGT1P63211 74 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FPGSQ05932 587 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 PDK1Q15118 436 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 USP41Q3LFD5 358 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ALS2CLQ60I27 953 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 MARK2Q7KZI7 788 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 CCDC124Q96CT7 223 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 IL17RAQ96F46 866 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 MRFAP1L1Q96HT8 127 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM118BQ9BPY3 351 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FBXO44Q9H4M3 255 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM198AQ9UFP1 575 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 SLC9A3R1O14745 358 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 CCL16O15467 120 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 PSMD3O43242 534 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ZBTB48P10074 688 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 ALOX15P16050 662 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 BDNFP23560 247 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 GRK3P35626 688 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 TBX4P57082 545 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CRHR2Q13324 411 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 NNTQ13423 1086 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 FAM110CQ1W6H9 321 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 SNAP47Q5SQN1 464 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 E4F1Q66K89 784 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 NT5DC3Q86UY8 548 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CBWD2Q8IUF1 395 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ANKMY2Q8IV38 441 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 TACO1Q9BSH4 297 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 C1QTNF7Q9BXJ2 289 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 RTN2O75298 545 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 APOA4P06727 396 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 BRAFP15056 766 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 HDCP19113 662 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 UBA1P22314 1058 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 CASP4P49662 377 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 BLVRAP53004 296 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 MTM1Q13496 603 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 PABPC1LQ4VXU2 614 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 RARS2Q5T160 578 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 RETSATQ6NUM9 610 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CHMP1BQ7LBR1 199 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 LGI2Q8N0V4 545 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 CAMKK1Q8N5S9 505 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 C17orf75Q9HAS0 396 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ZFYVE1Q9HBF4 777 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 RAB6BQ9NRW1 208 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 PKD2L2Q9NZM6 624 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 DDX20Q9UHI6 824 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 NFASCO94856 1347 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 MEFVO15553 781 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 EFCAB14O75071 495 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 RASSF9O75901 435 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ASGR1P07306 291 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 HPGDP15428 266 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 LAMB3Q13751 1172 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 DHX40Q8IX18 779 aaKnown RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 IDI2Q9BXS1 227 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ZDHHC6Q9H6R6 413 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 ATP13A1Q9HD20 1204 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 C20orf96Q9NUD7 363 aaPredicted RBP7.43□□□□□ -1.22
RAG1-201ENST00000299440 LNPEPQ9UIQ6 1025 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 SLC27A5Q9Y2P5 690 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 HES2Q9Y543 173 aa7.43□□□□□ -1.22
RAG1-201ENST00000299440 RFC1P35251 1148 aaPredicted RBP7.42□□□□□ -1.22
RAG1-201ENST00000299440 SREBF1P36956 1147 aa7.42□□□□□ -1.22
RAG1-201ENST00000299440 RFX5P48382 616 aaPredicted RBP7.42□□□□□ -1.22
RAG1-201ENST00000299440 BCAT1P54687 386 aa7.42□□□□□ -1.22
RAG1-201ENST00000299440 MTFR1Q15390 333 aa7.42□□□□□ -1.22
RAG1-201ENST00000299440 PSMD5Q16401 504 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms