RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 FGF13Q92913 245 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 ZFP37Q9Y6Q3 630 aaPredicted RBP12.89□□□□□ -0.35
HMGB2-201ENST00000296503 GNA14O95837 355 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
HMGB2-201ENST00000296503 NLRP12P59046 1061 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 CBX1P83916 185 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
HMGB2-201ENST00000296503 CCDC142Q17RM4 750 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 WDR44Q5JSH3 913 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 SCN4BQ8IWT1 228 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 GPR152Q8TDT2 470 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 PKMYT1Q99640 499 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 LPIN3Q9BQK8 851 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 KCNK12Q9HB15 430 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 CRTAC1Q9NQ79 661 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 AVENQ9NQS1 362 aaPredicted RBP12.89□□□□□ -0.35
HMGB2-201ENST00000296503 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 PAXBP1Q9Y5B6 917 aa12.89□□□□□ -0.35
HMGB2-201ENST00000296503 LRRN2O75325 713 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
HMGB2-201ENST00000296503 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
HMGB2-201ENST00000296503 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 DDR2Q16832 855 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 ST13P5Q8NFI4 369 aaPredicted RBP12.88□□□□□ -0.35
HMGB2-201ENST00000296503 MYCBPAPQ8TBZ2 947 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 PSMG2Q969U7 264 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 NME7Q9Y5B8 376 aa12.88□□□□□ -0.35
HMGB2-201ENST00000296503 DENND4AQ7Z401 1863 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 GJA1P17302 382 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CEBPBP17676 345 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 ATF6P18850 670 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 BDNFP23560 247 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 GRIK1P39086 918 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CCR2P41597 374 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 ZXDAP98168 799 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 SDHAF4Q5VUM1 108 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-201ENST00000296503 RSAD2Q8WXG1 361 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 EDAQ92838 391 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.351e-10■■■□□ 16.2
HMGB2-201ENST00000296503 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
HMGB2-201ENST00000296503 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-201ENST00000296503 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
HMGB2-201ENST00000296503 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
HMGB2-201ENST00000296503 ASPAP45381 313 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 GPR15P49685 360 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 NDST1P52848 882 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 MTMR3Q13615 1198 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 PRSS36Q5K4E3 855 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 B3GALNT2Q8NCR0 500 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 MED10Q9BTT4 135 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 GDE1Q9NZC3 331 aa12.87□□□□□ -0.35
HMGB2-201ENST00000296503 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 A0A1W2PRU2 124 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 MICAL2O94851 1124 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 FGF19O95750 216 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 CSH1P0DML2 217 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 CSH2P0DML3 217 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 CD58P19256 250 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 GABRR2P28476 465 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 FMO5P49326 533 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 EPHA5P54756 1037 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 CETN1Q12798 172 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 TDGQ13569 410 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 TEAD2Q15562 447 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 DPCR1Q3MIW9 517 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 PARM1Q6UWI2 310 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms