RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 PTGER2P43116 358 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 ACADSBP45954 432 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 GPSM2P81274 684 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 NTRK3Q16288 839 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 ATPAF2Q8N5M1 289 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 TSEN2Q8NCE0 465 aaKnown RBP11.46□□□□□ -0.57
PBRM1-201ENST00000296302 SH3TC2Q8TF17 1288 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 RMDN1Q96DB5 314 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 C17orf75Q9HAS0 396 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 DNAJC16Q9Y2G8 782 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 SNX13Q9Y5W8 968 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 IL18RAPO95256 599 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 MOCS2O96007 188 aaPredicted RBP11.46□□□□□ -0.57
PBRM1-201ENST00000296302 MUTP22033 750 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 RECQLP46063 649 aaPredicted RBP11.46□□□□□ -0.57
PBRM1-201ENST00000296302 STAT5BP51692 787 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 PTK6Q13882 451 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 SF3B3Q15393 1217 aaKnown RBP11.46□□□□□ -0.57
PBRM1-201ENST00000296302 FAM83EQ2M2I3 478 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 EPC2Q52LR7 807 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 CCDC60Q8IWA6 550 aaPredicted RBP11.46□□□□□ -0.57
PBRM1-201ENST00000296302 SHCBP1Q8NEM2 672 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 RIN3Q8TB24 985 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 TATDN2Q93075 761 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 MPP6Q9NZW5 540 aa11.46□□□□□ -0.57
PBRM1-201ENST00000296302 BNIP3LO60238 219 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 FAM200BP0CF97 657 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 ITGA4P13612 1032 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 CYP11B1P15538 503 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 TTMPQ5BVD1 217 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 IYDQ6PHW0 289 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 CCDC103Q8IW40 242 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 MREGQ8N565 214 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 CASP10Q92851 521 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 CCDC126Q96EE4 140 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 CDV3Q9UKY7 258 aaKnown RBP11.46□□□□□ -0.58
PBRM1-201ENST00000296302 SHOC2Q9UQ13 582 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 DAGLAQ9Y4D2 1042 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 COPG1Q9Y678 874 aaKnown RBP11.46□□□□□ -0.58
PBRM1-201ENST00000296302 LRRC10BA6NIK2 292 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 SLC37A4O43826 429 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 PROSCO94903 275 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 CUL2Q13617 745 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.58
PBRM1-201ENST00000296302 BTBD7Q9P203 1132 aa11.46□□□□□ -0.58
PBRM1-201ENST00000296302 GOLGA8TH3BQL2 631 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TIMM44O43615 452 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 SERPINB5P36952 375 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 IREB2P48200 963 aaKnown RBP11.45□□□□□ -0.58
PBRM1-201ENST00000296302 ST3GAL1Q11201 340 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 NT5C1AQ9BXI3 368 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 EPS8L2Q9H6S3 715 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 RNPEPL1Q9HAU8 725 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 EXOSC4Q9NPD3 245 aaKnown RBP11.45□□□□□ -0.58
PBRM1-201ENST00000296302 FKBP9O95302 570 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 DLGAP3O95886 979 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 BGNP21810 368 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 RFC5P40937 340 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 PEX5P50542 639 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 SEL1L3Q68CR1 1132 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 KCNV1Q6PIU1 500 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 FKBP9P1Q75LS8 142 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 LINC00523Q86TU6 105 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 RFWD2Q8NHY2 731 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 KLHL25Q9H0H3 589 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 IL1RL2Q9HB29 575 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 METTL5Q9NRN9 209 aaKnown RBP11.45□□□□□ -0.58
PBRM1-201ENST00000296302 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.45□□□□□ -0.58
PBRM1-201ENST00000296302 E2F8A0AVK6 867 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 FCGR1AP12314 374 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 EMC2Q15006 297 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TTC23LQ6PF05 361 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 LPCAT2Q7L5N7 544 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF184Q99676 751 aaPredicted RBP11.45□□□□□ -0.58
PBRM1-201ENST00000296302 MXRA8Q9BRK3 442 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 C17orf80Q9BSJ5 609 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 CYP39A1Q9NYL5 469 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TNS3Q68CZ2 1445 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 UBE2Q2LH0YL09 131 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 FCHO1O14526 889 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 ECE2O60344 883 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TPST1O60507 370 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 RALBP11234 206 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 MYBPC2Q14324 1141 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TMEM132DQ14C87 1099 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 NOP9Q86U38 636 aaKnown RBP11.45□□□□□ -0.58
PBRM1-201ENST00000296302 TMEM143Q96AN5 459 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 SPON2Q9BUD6 331 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 BRD8Q9H0E9 1235 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
PBRM1-201ENST00000296302 CLASP2O75122 1294 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 NDUFS3O75489 264 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms