RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 DNAAF5Q86Y56 855 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 OLIG1Q8TAK6 271 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 UBA3Q8TBC4 463 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 SLC2A14Q8TDB8 520 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 MYLPFQ96A32 169 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 PCED1BQ96HM7 432 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 FAM124BQ9H5Z6 455 aaPredicted RBP16.08■□□□□ 0.17
CCDC140-201ENST00000295226 SEPT11Q9NVA2 429 aaKnown RBP16.08■□□□□ 0.17
CCDC140-201ENST00000295226 LZTS1Q9Y250 596 aa16.08■□□□□ 0.17
CCDC140-201ENST00000295226 SOWAHDA6NJG2 315 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 OR6C75A6NL08 312 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 O00370 1275 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 TEX28O15482 410 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 CNPP09543 421 aaKnown RBP16.08■□□□□ 0.16
CCDC140-201ENST00000295226 CPB1P15086 417 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 GTF2F1P35269 517 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC140-201ENST00000295226 PRKCIP41743 596 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 FMO1Q01740 532 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 MTF1Q14872 753 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 PRPF38BQ5VTL8 546 aaKnown RBP16.08■□□□□ 0.16
CCDC140-201ENST00000295226 DENND1BQ6P3S1 775 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 RNF19BQ6ZMZ0 732 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 PALB2Q86YC2 1186 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 TMEM139Q8IV31 216 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 FUKQ8N0W3 1084 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 ATAD1Q8NBU5 361 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 MYCBPAPQ8TBZ2 947 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 BAG1Q99933 345 aaPredicted RBP16.08■□□□□ 0.16
CCDC140-201ENST00000295226 AGPAT1Q99943 283 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 MED10Q9BTT4 135 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC140-201ENST00000295226 ZNF518BQ9C0D4 1074 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 ZNF576Q9H609 170 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.16
CCDC140-201ENST00000295226 BACE2Q9Y5Z0 518 aa16.08■□□□□ 0.16
CCDC140-201ENST00000295226 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 MICAL2O94851 1124 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 VNN2O95498 520 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 CCDC172P0C7W6 258 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 ROR1Q01973 937 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 UBE3AQ05086 875 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 GOLGA7BQ2TAP0 167 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
CCDC140-201ENST00000295226 SYT11Q9BT88 431 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 ABI2Q9NYB9 513 aaPredicted RBP16.07■□□□□ 0.16
CCDC140-201ENST00000295226 TSPAN16Q9UKR8 245 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 SLC27A5Q9Y2P5 690 aa16.07■□□□□ 0.16
CCDC140-201ENST00000295226 MYH10P35580 1976 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 A0A1W2PPC1 479 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 WDR27A2RRH5 827 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 DDX3XO00571 662 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC140-201ENST00000295226 FSCN2O14926 492 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 TNFAIP3P21580 790 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 BDNFP23560 247 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 CYP2F1P24903 491 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 CDR2Q01850 454 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 CNGA2Q16280 664 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 TTC30AQ86WT1 665 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 DCP1BQ8IZD4 617 aaKnown RBP16.06■□□□□ 0.16
CCDC140-201ENST00000295226 CCAR2Q8N163 923 aaKnown RBP16.06■□□□□ 0.16
CCDC140-201ENST00000295226 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 PDCL3Q9H2J4 239 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 CRISPLD1Q9H336 500 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 TMEM30AQ9NV96 361 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 ADAMTS1Q9UHI8 967 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 KIAA1257Q9ULG3 409 aa16.06■□□□□ 0.16
CCDC140-201ENST00000295226 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC140-201ENST00000295226 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 M0QYV0 167 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 TULP2O00295 520 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 PER2O15055 1255 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 LPXNO60711 386 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 SOAT2O75908 522 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 BEST1O76090 585 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 TNNT1P13805 278 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 ARHGAP17Q68EM7 881 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 SLC8B1Q6J4K2 584 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 RAD9BQ6WBX8 426 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 RBM23Q86U06 439 aaKnown RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 SPATA2LQ8IUW3 424 aaPredicted RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 WDTC1Q8N5D0 677 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 KLHL5Q96PQ7 755 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 TTYH1Q9H313 450 aaPredicted RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 RXFP1Q9HBX9 757 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 TAS2R14Q9NYV8 317 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 STK39Q9UEW8 545 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 A0A087X0T9 212 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 MTMR11A4FU01 709 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 MED7O43513 233 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 FAM228BP0C875 321 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 FECHP22830 423 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 GFPT1Q06210 699 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms