RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ACLYP53396 1101 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 BEX3Q00994 111 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 DPYDQ12882 1025 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 ELOA2Q8IYF1 753 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PPTC7Q8NI37 304 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 MAGEB5Q9BZ81 275 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 FAM129AQ9BZQ8 928 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 COL20A1Q9P218 1284 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PDP2Q9P2J9 529 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 A0A1W2PQJ5 194 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 H0Y626 953 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 DAB1O75553 588 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRIM16O95361 564 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 ASGR1P07306 291 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PSMD7P51665 324 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 KDSRQ06136 332 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PDIA5Q14554 519 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 HEATR6Q6AI08 1181 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 MS4A14Q96JA4 679 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 GGT7Q9UJ14 662 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC13A4Q9UKG4 626 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 NFASCO94856 1347 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 CYTH1Q15438 398 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 TTC39CQ8N584 583 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 EXT2Q93063 718 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■■□ 22.8
SYNGAP1-201ENST00000293748 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 OGDHLQ9ULD0 1010 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 MTO1Q9Y2Z2 717 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 E7ENQ6 273 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PQBP1O60828 265 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PSEN2P49810 448 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 CXCL17Q6UXB2 119 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 NDUFA13Q9P0J0 144 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 ENO1P06733 434 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 LRRC8BQ6P9F7 803 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 KIAA2013Q8IYS2 634 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMCO5AQ8N6Q1 288 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 RNF139Q8WU17 664 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRIM51Q9BSJ1 452 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 FHOD1Q9Y613 1164 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 C16orf96A6NNT2 1141 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 CLDN3O15551 220 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 RAD51CO43502 376 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 KLHL2O95198 593 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 ESRRBO95718 433 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 GYPCP04921 128 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 SERPINB3P29508 390 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 GNA15P30679 374 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 TCF7P36402 384 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 VHLP40337 213 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 GALCP54803 685 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 INPP5AQ14642 412 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 NAB2Q15742 525 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 STK33Q9BYT3 514 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 AGO4Q9HCK5 861 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 UBN1Q9NPG3 1134 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 DDX28Q9NUL7 540 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 TEKT2Q9UIF3 430 aa12.38□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMEM120BA0PK00 339 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMEM247A6NEH6 219 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 CIITAP33076 1130 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 MFSD10Q14728 455 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZNF394Q53GI3 561 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 RFX8Q6ZV50 586 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 REXO1L1PQ8IX06 675 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 NAF1Q96HR8 494 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ERP44Q9BS26 406 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 PALMDQ9NP74 551 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 HBP1O60381 514 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 MAP4P27816 1152 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 OSTNP61366 133 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 MRPS15P82914 257 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRIP10Q15642 601 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZNF699Q32M78 642 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 Q4G0T1 1027 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 JAMLQ86YT9 394 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 RHPN2Q8IUC4 686 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 CMTM5Q96DZ9 223 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 C7orf25Q9BPX7 421 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms