RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 SH3TC2Q8TF17 1288 aa20.14■□□□□ 0.81
LSM12-201ENST00000293406 ALKBH8Q96BT7 664 aaKnown RBP20.14■□□□□ 0.81
LSM12-201ENST00000293406 PORCNQ9H237 461 aa20.14■□□□□ 0.81
LSM12-201ENST00000293406 VPS11Q9H270 941 aa20.14■□□□□ 0.81
LSM12-201ENST00000293406 C3orf70A6NLC5 250 aaPredicted RBP20.13■□□□□ 0.81
LSM12-201ENST00000293406 ASS1P00966 412 aaKnown RBP20.13■□□□□ 0.81
LSM12-201ENST00000293406 CST3P01034 146 aaPredicted RBP20.13■□□□□ 0.81
LSM12-201ENST00000293406 POLNQ7Z5Q5 900 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 BANPQ8N9N5 519 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 MZB1Q8WU39 189 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 RSAD2Q8WXG1 361 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 CDHR1Q96JP9 859 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 ZNF518BQ9C0D4 1074 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 MANSC1Q9H8J5 431 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 SLC24A3Q9HC58 644 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 NUMBLQ9Y6R0 609 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 ADGRA2Q96PE1 1338 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 CST8O60676 142 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 SMTNL2Q2TAL5 461 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.13■□□□□ 0.81
LSM12-201ENST00000293406 TAB3Q8N5C8 712 aaPredicted RBP20.13■□□□□ 0.81
LSM12-201ENST00000293406 KLF6Q99612 283 aaPredicted RBP20.13■□□□□ 0.81
LSM12-201ENST00000293406 OSBPL1AQ9BXW6 950 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 TRIM55Q9BYV6 548 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 C12orf65Q9H3J6 166 aaKnown RBP20.13■□□□□ 0.81
LSM12-201ENST00000293406 ZWILCHQ9H900 591 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 KANSL3Q9P2N6 904 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 SLC17A7Q9P2U7 560 aa20.13■□□□□ 0.81
LSM12-201ENST00000293406 A0A0G2JND7 137 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 WNT10BO00744 389 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 LMNAP02545 664 aaKnown RBP20.12■□□□□ 0.81
LSM12-201ENST00000293406 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 RPL22P35268 128 aaKnown RBP20.12■□□□□ 0.81
LSM12-201ENST00000293406 PCK1P35558 622 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 PTDSS1P48651 473 aaKnown RBP20.12■□□□□ 0.81
LSM12-201ENST00000293406 SUPT20HL1Q3ZLR7 823 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 WDTC1Q8N5D0 677 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 TTC13Q8NBP0 860 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 DCAKDQ8WVC6 231 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 KCNN1Q92952 543 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 WDR83Q9BRX9 315 aaKnown RBP20.12■□□□□ 0.81
LSM12-201ENST00000293406 FRMD8P1Q9BZ68 369 aaPredicted RBP20.12■□□□□ 0.81
LSM12-201ENST00000293406 DCLRE1BQ9H816 532 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 CISHQ9NSE2 258 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 EFR3BQ9Y2G0 817 aa20.12■□□□□ 0.81
LSM12-201ENST00000293406 E7ESA3 106 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 STAM2O75886 525 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 EDN1P05305 212 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 PSMA2P25787 234 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 GCKP35557 465 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 TGFB2P61812 414 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 MTM1Q13496 603 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 BBS9Q3SYG4 887 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 MIPEPQ99797 713 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
LSM12-201ENST00000293406 HEY2Q9UBP5 337 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 CCDC189A1A4V9 331 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 PLSCR1O15162 318 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 CCDC22O60826 627 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 ATP6V1C1P21283 382 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 EIF4BP23588 611 aaKnown RBP20.11■□□□□ 0.81
LSM12-201ENST00000293406 ARL2P36404 184 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 KCNT1Q5JUK3 1230 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 PDIK1LQ8N165 341 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 TSSK1BQ9BXA7 367 aa20.11■□□□□ 0.81
LSM12-201ENST00000293406 DHX33Q9H6R0 707 aaKnown RBP20.11■□□□□ 0.81
LSM12-201ENST00000293406 ALG13Q9NP73 1137 aaKnown RBP20.11■□□□□ 0.81
LSM12-201ENST00000293406 TCRBV7S3A2A0A539 114 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 EIF4E1BA6NMX2 242 aaKnown RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 HAUS5O94927 633 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 APBA3O96018 575 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 KRT7P08729 469 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 RFC1P35251 1148 aaPredicted RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 SLC25A11Q02978 314 aaKnown RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 C4orf50Q6ZRC1 276 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 BBS12Q6ZW61 710 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 LMNTD2Q8IXW0 634 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 SLC7A3Q8WY07 619 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 PTPRN2Q92932 1015 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 TUBB6Q9BUF5 446 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 CADM1Q9BY67 442 aaKnown RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 ZFATQ9P243 1243 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 XPO7Q9UIA9 1087 aaKnown RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 KIAA1217Q5T5P2 1943 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 DOCK5Q9H7D0 1870 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 CFAP69A5D8W1 941 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 A6NHS1 94 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 LPXNO60711 386 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 MT-ND3P03897 115 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 OATP04181 439 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 ATP4AP20648 1035 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 CDH5P33151 784 aaPredicted RBP20.1■□□□□ 0.81
LSM12-201ENST00000293406 AP3M2P53677 418 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 MYL6P60660 151 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 TSNAXIP1Q2TAA8 658 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 GNPTABQ3T906 1256 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 CMPK2Q5EBM0 449 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 CIAPIN1Q6FI81 312 aa20.1■□□□□ 0.81
LSM12-201ENST00000293406 WDR49Q8IV35 697 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms