RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MDH1P40925 334 aaKnown RBP17.77■□□□□ 0.43
CPSF4-201ENST00000292476 PDCLQ13371 301 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 CYP1B1Q16678 543 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 CLEC16AQ2KHT3 1053 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.43
CPSF4-201ENST00000292476 KCTD16Q68DU8 428 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 CROCCP2Q86T23 111 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 DDX42Q86XP3 938 aaKnown RBP eCLIP17.77■□□□□ 0.43
CPSF4-201ENST00000292476 SMG8Q8ND04 991 aaKnown RBP17.77■□□□□ 0.43
CPSF4-201ENST00000292476 PGBD4Q96DM1 585 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF560Q96MR9 790 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 APOL6Q9BWW8 343 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 PADI3Q9ULW8 664 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 GIT1Q9Y2X7 761 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 HES2Q9Y543 173 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 SMIM28A0A1B0GU29 152 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF623O75123 536 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 AKAP5P24588 427 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 CCT5P48643 541 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 PEX5P50542 639 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 PCDHB18PQ96TA0 734 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF518BQ9C0D4 1074 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 ZDHHC18Q9NUE0 388 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 KIAA1257Q9ULG3 409 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 CEP83Q9Y592 693 aa17.76■□□□□ 0.43
CPSF4-201ENST00000292476 THAP12O43422 761 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 LSM8O95777 96 aaKnown RBP17.75■□□□□ 0.43
CPSF4-201ENST00000292476 NUDT17P0C025 328 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 CD58P19256 250 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 NSFP46459 744 aaKnown RBP17.75■□□□□ 0.43
CPSF4-201ENST00000292476 CDK7P50613 346 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 BFSP2Q13515 415 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
CPSF4-201ENST00000292476 JAMLQ86YT9 394 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 C12orf50Q8NA57 414 aaPredicted RBP17.75■□□□□ 0.43
CPSF4-201ENST00000292476 UBLCP1Q8WVY7 318 aaPredicted RBP17.75■□□□□ 0.43
CPSF4-201ENST00000292476 ELMO3Q96BJ8 720 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 VCPIP1Q96JH7 1222 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 ZMAT2Q96NC0 199 aaKnown RBP17.75■□□□□ 0.43
CPSF4-201ENST00000292476 PLVAPQ9BX97 442 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 PRKAG2Q9UGJ0 569 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 MTUS1Q9ULD2 1270 aa17.75■□□□□ 0.43
CPSF4-201ENST00000292476 DCDC2CA8MYV0 355 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 MYO1FO00160 1098 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 NDUFAB1O14561 156 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CYP1A1P04798 512 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CLTBP09497 229 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 WEE2P0C1S8 567 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 GHRP10912 638 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CKBP12277 381 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 DHX9Q08211 1270 aaKnown RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 FAAP100Q0VG06 881 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CHRDL2Q6WN34 429 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 MICALCLQ6ZW33 695 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 ANKRD33Q7Z3H0 272 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 HOOK3Q86VS8 718 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF564Q8TBZ8 553 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF606Q8WXB4 792 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 PCDHA3Q9Y5H8 950 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 A0A087WUV0 522 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CPP00450 1065 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 UNGP13051 313 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 COMTP21964 271 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CD52P31358 61 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 PTGIRP43119 386 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 FNTAP49354 379 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 ATP1A2P50993 1020 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 CENPCQ03188 943 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 LPIN1Q14693 890 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 C9orf57Q5W0N0 161 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 SCARA5Q6ZMJ2 495 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 FAM126BQ8IXS8 530 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 AGO3Q9H9G7 860 aaKnown RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 ACP6Q9NPH0 428 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-201ENST00000292476 PCDHGC3Q9UN70 934 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 NR2E1Q9Y466 385 aa17.74■□□□□ 0.43
CPSF4-201ENST00000292476 A0A0U1RQF3 1178 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TRIM43BA6NCK2 446 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 FAM163BP0C2L3 166 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 PAX3P23760 479 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 CDR1P51861 262 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 INCA1Q0VD86 236 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 STILQ15468 1287 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 SV2CQ496J9 727 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 LIN9Q5TKA1 542 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 C10orf67Q8IYJ2 551 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 PRELID2Q8N945 189 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TMEM35BQ8NCS4 154 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 SLCO2A1Q92959 643 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TRIM43Q96BQ3 446 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TMEM176AQ96HP8 235 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TOX2Q96NM4 488 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 FTHL17Q9BXU8 183 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TRPV6Q9H1D0 765 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms