RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 CRTAC1Q9NQ79 661 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 SEMA4GQ9NTN9 838 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 RBAKQ9NYW8 714 aaPredicted RBP9.48□□□□□ -0.89
TFF1-201ENST00000291527 GCNT4Q9P109 453 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
TFF1-201ENST00000291527 INVSQ9Y283 1065 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 KIF3AQ9Y496 699 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 PCDHB5Q9Y5E4 795 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 WNT6Q9Y6F9 365 aa9.48□□□□□ -0.89
TFF1-201ENST00000291527 ASCC3Q8N3C0 2202 aaKnown RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 CEP192Q8TEP8 1941 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 ADAMTS9Q9P2N4 1935 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 GABRDO14764 452 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 RNF40O75150 1001 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 PAPSS2O95340 614 aaPredicted RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 RETP07949 1114 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 KRT19P08727 400 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 PDGFRBP09619 1106 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 MCM2P49736 904 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 ITPRIPL2Q3MIP1 535 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 SV2CQ496J9 727 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 INTS6LQ5JSJ4 861 aaKnown RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 LAIR1Q6GTX8 287 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 SV2BQ7L1I2 683 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 LIMS2Q7Z4I7 341 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 ITIH5Q86UX2 942 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 MON1AQ86VX9 555 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 WDR5BQ86VZ2 330 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 LONP2Q86WA8 852 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 THEM5Q8N1Q8 247 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 SPPL2BQ8TCT7 592 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 PLEKHO2Q8TD55 490 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 CHAMP1Q96JM3 812 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 HHIPQ96QV1 700 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 TSPAN18Q96SJ8 248 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 MRPL45Q9BRJ2 306 aaKnown RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 FAM126AQ9BYI3 521 aaPredicted RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 ARRDC1-AS1Q9H2J1 176 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 TDP1Q9NUW8 608 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 OBP2AQ9NY56 170 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 HSFX1Q9UBD0 423 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
TFF1-201ENST00000291527 SNX9Q9Y5X1 595 aa9.47□□□□□ -0.89
TFF1-201ENST00000291527 CLDN5O00501 218 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 TRDMT1O14717 391 aaKnown RBP9.46□□□□□ -0.9
TFF1-201ENST00000291527 CLIC2O15247 247 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 TGFB1I1O43294 461 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 NOL4O94818 638 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 IL18RAPO95256 599 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
TFF1-201ENST00000291527 HNRNPLP14866 589 aaKnown RBP eCLIP9.46□□□□□ -0.9
TFF1-201ENST00000291527 CDC25CP30307 473 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 GJA4P35212 333 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 PGFP49763 221 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 NRLP54845 237 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 LRRC32Q14392 662 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 VEPH1Q14D04 833 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 SLC39A14Q15043 492 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 ZNF77Q15935 545 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 E2F4Q16254 413 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.9
TFF1-201ENST00000291527 TCEAL6Q6IPX3 200 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 FAM171BQ6P995 826 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.9
TFF1-201ENST00000291527 PRR23CQ6ZRP0 262 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 SCN4BQ8IWT1 228 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 DCP1BQ8IZD4 617 aaKnown RBP9.46□□□□□ -0.9
TFF1-201ENST00000291527 ADGRF2Q8IZF7 708 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 TCEAL3Q969E4 200 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 WBP2Q969T9 261 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 ACBD6Q9BR61 282 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 RNF38Q9H0F5 515 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 DPEP3Q9H4B8 488 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 TRPC7Q9HCX4 862 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 ZDHHC4Q9NPG8 344 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 GDAP2Q9NXN4 497 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 STK17AQ9UEE5 414 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 GMEB2Q9UKD1 530 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 CDV3Q9UKY7 258 aaKnown RBP9.46□□□□□ -0.9
TFF1-201ENST00000291527 DSEQ9UL01 958 aa9.46□□□□□ -0.9
TFF1-201ENST00000291527 TNRC6BQ9UPQ9 1833 aaKnown RBP9.45□□□□□ -0.9
TFF1-201ENST00000291527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
TFF1-201ENST00000291527 TM4SF5O14894 197 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 BMP15O95972 392 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 GAP43P17677 238 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 GARTP22102 1010 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 BDNFP23560 247 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 STAT6P42226 847 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 RAP1GAPP47736 663 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 SLC6A11P48066 632 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 CASP4P49662 377 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 USP4Q13107 963 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 POSTNQ15063 836 aa9.45□□□□□ -0.9
TFF1-201ENST00000291527 TAF12Q16514 161 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms