RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 PAPSS2O95340 614 aaPredicted RBP15.05■□□□□ -0
TPM1-202ENST00000288398 F11P03951 625 aa15.05■□□□□ -0
TPM1-202ENST00000288398 USP17L7P0C7H9 530 aa15.05■□□□□ -0
TPM1-202ENST00000288398 HMGA1P17096 107 aaKnown RBP15.05■□□□□ -0
TPM1-202ENST00000288398 CYP2F1P24903 491 aa15.05■□□□□ -0
TPM1-202ENST00000288398 ANXA13P27216 316 aa15.05■□□□□ -0
TPM1-202ENST00000288398 IFNAR2P48551 515 aa15.05■□□□□ -0
TPM1-202ENST00000288398 NASPP49321 788 aaPredicted RBP15.05■□□□□ -0
TPM1-202ENST00000288398 PDE6CP51160 858 aa15.05■□□□□ -0
TPM1-202ENST00000288398 SPEM2Q0P670 501 aa15.05■□□□□ -0
TPM1-202ENST00000288398 KCNB1Q14721 858 aa15.05■□□□□ -0
TPM1-202ENST00000288398 SDHAF4Q5VUM1 108 aa15.05■□□□□ -0
TPM1-202ENST00000288398 LMBRD2Q68DH5 695 aaPredicted RBP15.05■□□□□ -0
TPM1-202ENST00000288398 DPH6Q7L8W6 267 aa15.05■□□□□ -0
TPM1-202ENST00000288398 ZSWIM2Q8NEG5 633 aa15.05■□□□□ -0
TPM1-202ENST00000288398 USP13Q92995 863 aaPredicted RBP15.05■□□□□ -0
TPM1-202ENST00000288398 FUBP3Q96I24 572 aaKnown RBP eCLIP15.05■□□□□ -0
TPM1-202ENST00000288398 EBF3Q9H4W6 596 aa15.05■□□□□ -0
TPM1-202ENST00000288398 INTS13Q9NVM9 706 aa15.05■□□□□ -0
TPM1-202ENST00000288398 EHD2Q9NZN4 543 aa15.05■□□□□ -0
TPM1-202ENST00000288398 MAGEC2Q9UBF1 373 aaPredicted RBP15.05■□□□□ -0
TPM1-202ENST00000288398 A0A087X0B3 334 aa15.04■□□□□ -0
TPM1-202ENST00000288398 EIF3DO15371 548 aaKnown RBP eCLIP15.04■□□□□ -0
TPM1-202ENST00000288398 FOXD2O60548 495 aaPredicted RBP15.04■□□□□ -0
TPM1-202ENST00000288398 PPP6R2O75170 966 aa15.04■□□□□ -0
TPM1-202ENST00000288398 NOL4O94818 638 aa15.04■□□□□ -0
TPM1-202ENST00000288398 TNNI1P19237 187 aa15.04■□□□□ -0
TPM1-202ENST00000288398 WNT7BP56706 349 aa15.04■□□□□ -0
TPM1-202ENST00000288398 CCINQ13939 588 aa15.04■□□□□ -0
TPM1-202ENST00000288398 GAS6Q14393 721 aa15.04■□□□□ -0
TPM1-202ENST00000288398 ZNF268Q14587 947 aaPredicted RBP15.04■□□□□ -0
TPM1-202ENST00000288398 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
TPM1-202ENST00000288398 HS2ST1Q7LGA3 356 aa15.04■□□□□ -0
TPM1-202ENST00000288398 WDR49Q8IV35 697 aa15.04■□□□□ -0
TPM1-202ENST00000288398 LINC00301Q8NCQ3 95 aa15.04■□□□□ -0
TPM1-202ENST00000288398 STKLD1Q8NE28 680 aa15.04■□□□□ -0
TPM1-202ENST00000288398 TRMT2BQ96GJ1 504 aaKnown RBP15.04■□□□□ -0
TPM1-202ENST00000288398 SYT15Q9BQS2 421 aa15.04■□□□□ -0
TPM1-202ENST00000288398 FGFBP2Q9BYJ0 223 aa15.04■□□□□ -0
TPM1-202ENST00000288398 SNX25Q9H3E2 840 aa15.04■□□□□ -0
TPM1-202ENST00000288398 HSPBP1Q9NZL4 362 aa15.04■□□□□ -0
TPM1-202ENST00000288398 CDH9Q9ULB4 789 aa15.04■□□□□ -0
TPM1-202ENST00000288398 CCL26Q9Y258 94 aa15.04■□□□□ -0
TPM1-202ENST00000288398 GPR179Q6PRD1 2367 aa15.04■□□□□ -0
TPM1-202ENST00000288398 CUTAO60888 179 aa15.03■□□□□ -0
TPM1-202ENST00000288398 LRP3O75074 770 aa15.03■□□□□ -0
TPM1-202ENST00000288398 DLATP10515 647 aaKnown RBP15.03■□□□□ -0
TPM1-202ENST00000288398 GRIK1P39086 918 aa15.03■□□□□ -0
TPM1-202ENST00000288398 MAGEA11P43364 429 aa15.03■□□□□ -0
TPM1-202ENST00000288398 TNNC1P63316 161 aa15.03■□□□□ -0
TPM1-202ENST00000288398 CYP27A1Q02318 531 aa15.03■□□□□ -0
TPM1-202ENST00000288398 FAM160A1Q05DH4 1040 aa15.03■□□□□ -0
TPM1-202ENST00000288398 NR1H3Q13133 447 aa15.03■□□□□ -0
TPM1-202ENST00000288398 MTF1Q14872 753 aa15.03■□□□□ -0
TPM1-202ENST00000288398 FAM26FQ5R3K3 315 aa15.03■□□□□ -0
TPM1-202ENST00000288398 TRIM68Q6AZZ1 485 aa15.03■□□□□ -0
TPM1-202ENST00000288398 TMEM150AQ86TG1 271 aa15.03■□□□□ -0
TPM1-202ENST00000288398 CBWD2Q8IUF1 395 aa15.03■□□□□ -0
TPM1-202ENST00000288398 ATP2A3Q93084 1043 aa15.03■□□□□ -0
TPM1-202ENST00000288398 FAM83CQ9BQN1 747 aa15.03■□□□□ -0
TPM1-202ENST00000288398 RTKNQ9BST9 563 aa15.03■□□□□ -0
TPM1-202ENST00000288398 TRIM9Q9C026 710 aa15.03■□□□□ -0
TPM1-202ENST00000288398 MAGEF1Q9HAY2 307 aa15.03■□□□□ -0
TPM1-202ENST00000288398 DUS2Q9NX74 493 aaKnown RBP15.03■□□□□ -0
TPM1-202ENST00000288398 FAM13BQ9NYF5 915 aa15.03■□□□□ -0
TPM1-202ENST00000288398 TFIP11Q9UBB9 837 aaKnown RBP15.03■□□□□ -0
TPM1-202ENST00000288398 DMXL1Q9Y485 3027 aa15.03■□□□□ -0
TPM1-202ENST00000288398 CACNA1AO00555 2505 aa15.02■□□□□ -0
TPM1-202ENST00000288398 UBE4BO95155 1302 aa15.02■□□□□ -0
TPM1-202ENST00000288398 MED19A0JLT2 244 aaPredicted RBP15.02■□□□□ -0
TPM1-202ENST00000288398 K7ESF4 209 aa15.02■□□□□ -0
TPM1-202ENST00000288398 YEATS4O95619 227 aa15.02■□□□□ -0
TPM1-202ENST00000288398 CCDC192P0DO97 292 aa15.02■□□□□ -0
TPM1-202ENST00000288398 PDIA4P13667 645 aaKnown RBP15.02■□□□□ -0
TPM1-202ENST00000288398 DRD1P21728 446 aa15.02■□□□□ -0
TPM1-202ENST00000288398 PSMC1P62191 440 aaKnown RBP15.02■□□□□ -0
TPM1-202ENST00000288398 TRPC3Q13507 836 aa15.02■□□□□ -0
TPM1-202ENST00000288398 SNRNP35Q16560 246 aaKnown RBP15.02■□□□□ -0
TPM1-202ENST00000288398 SOWAHAQ2M3V2 549 aa15.02■□□□□ -0
TPM1-202ENST00000288398 FBXO43Q4G163 708 aa15.02■□□□□ -0
TPM1-202ENST00000288398 TMEM196Q5HYL7 178 aa15.02■□□□□ -0
TPM1-202ENST00000288398 VSTM1Q6UX27 236 aa15.02■□□□□ -0
TPM1-202ENST00000288398 WDR5BQ86VZ2 330 aa15.02■□□□□ -0
TPM1-202ENST00000288398 OSTM1Q86WC4 334 aa15.02■□□□□ -0
TPM1-202ENST00000288398 RDH13Q8NBN7 331 aa15.02■□□□□ -0
TPM1-202ENST00000288398 CCDC26Q8TAB7 109 aa15.02■□□□□ -0
TPM1-202ENST00000288398 HPS3Q969F9 1004 aa15.02■□□□□ -0
TPM1-202ENST00000288398 MYLPFQ96A32 169 aa15.02■□□□□ -0
TPM1-202ENST00000288398 FAM84AQ96KN4 292 aa15.02■□□□□ -0
TPM1-202ENST00000288398 MYRFLQ96LU7 910 aa15.02■□□□□ -0
TPM1-202ENST00000288398 P2RY13Q9BPV8 354 aa15.02■□□□□ -0
TPM1-202ENST00000288398 HPS4Q9NQG7 708 aa15.02■□□□□ -0
TPM1-202ENST00000288398 KBTBD4Q9NVX7 518 aa15.02■□□□□ -0
TPM1-202ENST00000288398 TRPM5Q9NZQ8 1165 aa15.02■□□□□ -0
TPM1-202ENST00000288398 SIX4Q9UIU6 781 aa15.02■□□□□ -0
TPM1-202ENST00000288398 TRDMT1O14717 391 aaKnown RBP15.01□□□□□ -0.01
TPM1-202ENST00000288398 GABRDO14764 452 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 TRIM66O15016 1216 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 HRO43593 1189 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 PHACTR2O75167 634 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms