RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 CFLARO15519 480 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 CHP2O43745 196 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 COBLO75128 1261 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 THRAP10827 490 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 NCF2P19878 526 aaPredicted RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 MFSD4BQ5TF39 518 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ADAT2Q7Z6V5 191 aaKnown RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 RFX6Q8HWS3 928 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 MDM1Q8TC05 714 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 CLEC4MQ9H2X3 399 aaPredicted RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 COX16Q9P0S2 106 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 VTI1BQ9UEU0 232 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 KNDC1Q76NI1 1749 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 HOXC6P09630 235 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ALADP13716 330 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 SLCO1A2P46721 670 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 CAV3P56539 151 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 SLC34A1Q06495 639 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ABRQ12979 859 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 KLHL12Q53G59 568 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 BRINP3Q76B58 766 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 CPXCR1Q8N123 301 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ZNF513Q8N8E2 541 aaPredicted RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ASB2Q96Q27 587 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 TMEM109Q9BVC6 243 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 CAAP1Q9H8G2 361 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 MANSC1Q9H8J5 431 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 FETUBQ9UGM5 382 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 C3P01024 1663 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 SALL1Q9NSC2 1324 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ERI2A8K979 691 aaKnown RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 SDC4P31431 198 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 FMO5P49326 533 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 PSMC6P62333 389 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 TTC39BQ5VTQ0 682 aaPredicted RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 MIS18BP1Q6P0N0 1132 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 KYAT3Q6YP21 454 aaKnown RBP8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 ANKZF1Q9H8Y5 726 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 NAGPAQ9UK23 515 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 MAPRE3Q9UPY8 281 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 SLIT3O75094 1523 aa8.71□□□□□ -1.01
CACNA1D-201ENST00000288139 MAGEB2O15479 319 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 VPS4BO75351 444 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 CYBBP04839 570 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 AKAP5P24588 427 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 ENPEPQ07075 957 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 TMEM154Q6P9G4 183 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 FAM81AQ8TBF8 368 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 S100ZQ8WXG8 99 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 RMND5BQ96G75 393 aaPredicted RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 CASS4Q9NQ75 786 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 TAGLN3Q9UI15 199 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 TBC1D25Q3MII6 688 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 BOLA3Q53S33 107 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 PNPT1Q8TCS8 783 aaKnown RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 TOPORSQ9NS56 1045 aaPredicted RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 DDX20Q9UHI6 824 aaKnown RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 RAB23Q9ULC3 237 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 SLC7A5Q01650 507 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 NCF4Q15080 339 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 SLFN13Q68D06 897 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 PYHIN1Q6K0P9 492 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MINDY2Q8NBR6 621 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MAF1Q9H063 256 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 VPS11Q9H270 941 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 LRMDAQ9H2I8 198 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 RABGEF1Q9UJ41 708 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 UNC13CQ8NB66 2214 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 DDX39AO00148 427 aaKnown RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 BNIP3LO60238 219 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MTFR1Q15390 333 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MARK2Q7KZI7 788 aaKnown RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MAEAQ7L5Y9 396 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 SCUBE1Q8IWY4 988 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 SRBD1Q8N5C6 995 aaKnown RBP8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 PDPRQ8NCN5 879 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 SETD9Q8NE22 299 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 EFCAB1Q9HAE3 211 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 KMT5AQ9NQR1 393 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 MARK1Q9P0L2 795 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 KIAA1257Q9ULG3 409 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 ZNF407Q9C0G0 2248 aa8.71□□□□□ -1.02
CACNA1D-201ENST00000288139 SIGLEC1Q9BZZ2 1709 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 LRRIQ4A6NIV6 560 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 PECAM1P16284 738 aaPredicted RBP8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 FDFT1P37268 417 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 RPS6KA3P51812 740 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 BCAR1P56945 870 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 ZNF200P98182 395 aaPredicted RBP8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 DRAP1Q14919 205 aaPredicted RBP8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 HEATR6Q6AI08 1181 aaKnown RBP8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 VPS35Q96QK1 796 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 PNKPQ96T60 521 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 SARS2Q9NP81 518 aaKnown RBP8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 SALL3Q9BXA9 1300 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 VCLP18206 1134 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 TMC3Q7Z5M5 1100 aa8.7□□□□□ -1.02
CACNA1D-201ENST00000288139 KRT73Q86Y46 540 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms