RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
TRIM23-202ENST00000274327 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
TRIM23-202ENST00000274327 FAAP100Q0VG06 881 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 APBB2Q92870 758 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 MCRS1Q96EZ8 462 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 TNIP3Q96KP6 325 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRIM23-202ENST00000274327 EPC1Q9H2F5 836 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 ANKZF1Q9H8Y5 726 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 FAM49BQ9NUQ9 324 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 TMEM161AQ9NX61 479 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 TMEM59LQ9UK28 342 aa15.36■□□□□ 0.05
TRIM23-202ENST00000274327 SIGLEC16A6NMB1 481 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 CXCL10P02778 98 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 MARCKSL1P49006 195 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 PSMC1P62191 440 aaKnown RBP15.35■□□□□ 0.05
TRIM23-202ENST00000274327 TERF2Q15554 542 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 TIGD5Q53EQ6 642 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 GLB1LQ6UWU2 654 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 DSTYKQ6XUX3 929 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 SPATA18Q8TC71 538 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 STK32AQ8WU08 396 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 SLC35F5Q8WV83 523 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 SEPT8Q92599 483 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
TRIM23-202ENST00000274327 TTC3P53804 2025 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 PGRMC1O00264 195 aaKnown RBP15.34■□□□□ 0.05
TRIM23-202ENST00000274327 PARNO95453 639 aaKnown RBP15.34■□□□□ 0.05
TRIM23-202ENST00000274327 LHX1P48742 406 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 OGDHQ02218 1023 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 DSC1Q08554 894 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 ZNF252P-AS1Q0IIN9 211 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 TRIM60Q495X7 471 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 NOMO2Q5JPE7 1267 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 ANKRD52Q8NB46 1076 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 B3GALNT2Q8NCR0 500 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
TRIM23-202ENST00000274327 MCEEQ96PE7 176 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 SLC4A5Q9BY07 1137 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 MIS12Q9H081 205 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
TRIM23-202ENST00000274327 HESX1Q9UBX0 185 aa15.34■□□□□ 0.05
TRIM23-202ENST00000274327 M0QZQ0 153 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 TULP2O00295 520 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 CAPN15O75808 1086 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 CYP11A1P05108 521 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 CCDC130P13994 396 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 RPL34P49207 117 aaKnown RBP15.33■□□□□ 0.05
TRIM23-202ENST00000274327 TLE2Q04725 743 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 PDE4CQ08493 712 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 KIAA0319Q5VV43 1072 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 DCLRE1AQ6PJP8 1040 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.33■□□□□ 0.05
TRIM23-202ENST00000274327 URGCPQ8TCY9 931 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 FNIP1Q8TF40 1166 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 DIS3LQ8TF46 1054 aaKnown RBP15.33■□□□□ 0.05
TRIM23-202ENST00000274327 RNPC3Q96LT9 517 aaKnown RBP15.33■□□□□ 0.05
TRIM23-202ENST00000274327 HNRNPABQ99729 332 aaKnown RBP15.33■□□□□ 0.05
TRIM23-202ENST00000274327 HIPK3Q9H422 1215 aa15.33■□□□□ 0.05
TRIM23-202ENST00000274327 MICAL3Q7RTP6 2002 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 B4GALT3O60512 393 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 B3GAT3O94766 335 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 KRT3P12035 628 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 PTPN1P18031 435 aaKnown RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 GJA8P48165 433 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 BCAT1P54687 386 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 RNASE9P60153 205 aaKnown RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 BST2Q10589 180 aaKnown RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 PKN2Q16513 984 aaKnown RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 DCUN1D2Q6PH85 259 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 ZNF771Q7L3S4 317 aaPredicted RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 TMEM110Q86TL2 294 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 COLGALT2Q8IYK4 626 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 NIPA2Q8N8Q9 360 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 JOSD2Q8TAC2 188 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 SCLYQ96I15 445 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 SYNCQ9H7C4 482 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 DDX43Q9NXZ2 648 aaKnown RBP15.33■□□□□ 0.04
TRIM23-202ENST00000274327 KANSL3Q9P2N6 904 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 CEP350Q5VT06 3117 aa15.33■□□□□ 0.04
TRIM23-202ENST00000274327 E5RJQ4 531 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 TMEM189-UBE2V1I3L0A0 370 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 PSTPIP1O43586 416 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 ATP2C2O75185 946 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 DDHD2O94830 711 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 RHOXF2BP0C7M4 288 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 ODC1P11926 461 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 ACAT1P24752 427 aaKnown RBP15.32■□□□□ 0.04
TRIM23-202ENST00000274327 ADORA2BP29275 332 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 BRCC3P46736 316 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 RWDD2BP57060 319 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 TAS2R40P59535 323 aa15.32■□□□□ 0.04
TRIM23-202ENST00000274327 ZNF211Q13398 564 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms