RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ADRA1DP25100 572 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 SSTR1P30872 391 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
VPS33A-201ENST00000267199 CCNHP51946 323 aaPredicted RBP12.05□□□□□ -0.48
VPS33A-201ENST00000267199 CERS5Q8N5B7 392 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 SEPT1Q8WYJ6 367 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 CMTM5Q96DZ9 223 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 NIF3L1Q9GZT8 377 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 KCTD10Q9H3F6 313 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 KLHL2O95198 593 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 SRGAP2BP0DMP2 458 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 WASHC2DQ5SRD0 308 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 IRF2BP2Q7Z5L9 587 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 LRRC6Q86X45 466 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 PPIL6Q8IXY8 311 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 POU5F2Q8N7G0 328 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 NEUROG2Q9H2A3 272 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 CYP39A1Q9NYL5 469 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 BFARQ9NZS9 450 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 ASTN1O14525 1302 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 FCHO1O14526 889 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 KPNA2P52292 529 aaKnown RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 BMPR2Q13873 1038 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 FLOT2Q14254 428 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 RRP1BQ14684 758 aaKnown RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 ZBTB41Q5SVQ8 909 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 C1orf186Q6ZWK4 172 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PID1Q7Z2X4 250 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 EXOC3L1Q86VI1 746 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 NID2Q14112 1375 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 ADORA2BP29275 332 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 NUDT2P50583 147 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 CKAP2Q8WWK9 683 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PGBD4Q96DM1 585 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 KIF12Q96FN5 646 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 SPC25Q9HBM1 224 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 ORC6Q9Y5N6 252 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 SYCE1LA8MT33 242 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 MEI4A8MW99 385 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 KDM1AO60341 852 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 E2F6O75461 281 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PDE5AO76074 875 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PYGBP11216 843 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 MAP4P27816 1152 aaKnown RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PPP3CAQ08209 521 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 XRCC4Q13426 336 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 CCDC33Q8N5R6 958 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 TTC8Q8TAM2 541 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 LNX1Q8TBB1 728 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 SYTL5Q8TDW5 730 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 TTYH3Q9C0H2 523 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 USP20Q9Y2K6 914 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 A8MXQ7 604 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 FOXO6A8MYZ6 492 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PROSCO94903 275 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 CLPTM1O96005 669 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 ATICP31939 592 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PEX5P50542 639 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 HGSNATQ68CP4 663 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 NOP9Q86U38 636 aaKnown RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 CENPTQ96BT3 561 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 OPTNQ96CV9 577 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 PDCD2LQ9BRP1 358 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 BTBD10Q9BSF8 475 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 CCDC134Q9H6E4 229 aa12.04□□□□□ -0.48
VPS33A-201ENST00000267199 STX18Q9P2W9 335 aaKnown RBP12.04□□□□□ -0.48
VPS33A-201ENST00000267199 KRT36O76013 467 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 PECAM1P16284 738 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-201ENST00000267199 TMED10P49755 219 aaKnown RBP12.03□□□□□ -0.48
VPS33A-201ENST00000267199 DLG4P78352 724 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 MTFR1Q15390 333 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-201ENST00000267199 PRUNE1Q86TP1 453 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 C4orf19Q8IY42 314 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 CATSPER1Q8NEC5 780 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 ZSWIM2Q8NEG5 633 aa12.03□□□□□ -0.48
VPS33A-201ENST00000267199 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms