RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GCLMP48507 274 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ARSEP51690 589 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 SH3D19Q5HYK7 790 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CENPTQ96BT3 561 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 TSPAN17Q96FV3 270 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 RBM15Q96T37 977 aaKnown RBP eCLIP5.93□□□□□ -1.46
VCAN-201ENST00000265077 ECSITQ9BQ95 431 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PTPRZ1P23471 2315 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 C1orf232A0A0U1RR37 186 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 EPN2O95208 641 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 SNX17Q15036 470 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 C7orf31Q8N865 590 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 HPS3Q969F9 1004 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ZNF512BQ96KM6 892 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 VPS11Q9H270 941 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 COG4Q9H9E3 785 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 GJB4Q9NTQ9 266 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ZC3H7BQ9UGR2 993 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 APPL1Q9UKG1 709 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CDK5RAP2Q96SN8 1893 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 HTR3EA5X5Y0 456 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 TBC1D4O60343 1298 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ALDH18A1P54886 795 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 KLHL12Q53G59 568 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 GALNT4Q8N4A0 578 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ZNF555Q8NEP9 628 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 TOPORSQ9NS56 1045 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 FIS1Q9Y3D6 152 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 SUPT20HL1Q3ZLR7 823 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 RUNDC3AQ59EK9 446 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 OXER1Q8TDS5 423 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CYGBQ8WWM9 190 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CITED4Q96RK1 184 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CHP1Q99653 195 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 UQCC2Q9BRT2 126 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 IARS2Q9NSE4 1012 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 WHRNQ9P202 907 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CDYLQ9Y232 598 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 A0A1W2PRG6 482 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 DYNLL1P63167 89 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 MAPK6Q16659 721 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CDO1Q16878 200 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 RABL6Q3YEC7 729 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 C4orf22Q6V702 233 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 LRRC20Q8TCA0 184 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 COA1Q9GZY4 146 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CYP4F11Q9HBI6 524 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 A0A087WXM4 84 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 A0A1W2PQ72 361 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 DNAJC3Q13217 504 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 FAM47CQ5HY64 1035 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ANGPTL8Q6UXH0 198 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ERGIC2Q96RQ1 377 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ERP44Q9BS26 406 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PABPC3Q9H361 631 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 PCDH12Q9NPG4 1184 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 SUGT1Q9Y2Z0 365 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 SPTBN2O15020 2390 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 LOXHD1Q8IVV2 1947 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CENPXA8MT69 81 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 MAPK11Q15759 364 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 USPL1Q5W0Q7 1092 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 ZNF786Q8N393 782 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 SCFD1Q8WVM8 642 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 TRIM45Q9H8W5 580 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 CCDC59Q9P031 241 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 COPG2Q9UBF2 871 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 STK39Q9UEW8 545 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PCDHA6Q9UN73 950 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PCDHA8Q9Y5H6 950 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 STIP1P31948 543 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 RWDD4Q6NW29 188 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 PRR23BQ6ZRT6 265 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CLVS1Q8IUQ0 354 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 SH3RF3Q8TEJ3 882 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 BTBD10Q9BSF8 475 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PNMA3Q9UL41 463 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 TDRKHQ9Y2W6 561 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 MROH7Q68CQ1 1323 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CYP2D7A0A087X1C5 515 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 MYO1DO94832 1006 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TNFRSF8P28908 595 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 HOXA13P31271 388 aaPredicted RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 PEX3P56589 373 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 DUOXA2Q1HG44 320 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 MTERF2Q49AM1 385 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ATAD3BQ5T9A4 648 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 CCNYL1Q8N7R7 359 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 CASKIN2Q8WXE0 1202 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 JADE3Q92613 823 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 PLA2G12BQ9BX93 195 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 OSBPL6Q9BZF3 934 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 GNB5O14775 395 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 MTSS1O43312 755 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ANKRD40Q6AI12 368 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SCARA5Q6ZMJ2 495 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SNX19Q92543 992 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 AGPAT1Q99943 283 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 OSBPP22059 807 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 CCNFP41002 786 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms