RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 OBSL1O75147 1896 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 ZMYND10O75800 440 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 CACNA2D1P54289 1103 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 RAD23BP54727 409 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 GCNT1Q02742 428 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 SDHAF4Q5VUM1 108 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 IQCEQ6IPM2 695 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 TMEM270Q6UE05 265 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 SPATA2LQ8IUW3 424 aaPredicted RBP19.52■□□□□ 0.71
SDF4-201ENST00000263741 GPIHBP1Q8IV16 184 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 GPR152Q8TDT2 470 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 PCMTD1Q96MG8 357 aaPredicted RBP19.52■□□□□ 0.71
SDF4-201ENST00000263741 B3GNT5Q9BYG0 378 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 ZNF518BQ9C0D4 1074 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 PCDHB5Q9Y5E4 795 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 PCDHB4Q9Y5E5 795 aa19.52■□□□□ 0.71
SDF4-201ENST00000263741 VCANP13611 3396 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 CCDC195A0A1B0GUA6 201 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 FAM163BP0C2L3 166 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 BDNFP23560 247 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 TWF1Q12792 350 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 UNC93AQ86WB7 457 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 TCEAL8Q8IYN2 117 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 SLC4A11Q8NBS3 891 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 TMEM30AQ9NV96 361 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 CD207Q9UJ71 328 aa19.51■□□□□ 0.71
SDF4-201ENST00000263741 A0A1B0GTH6 734 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 RNF225M0QZC1 329 aaPredicted RBP19.5■□□□□ 0.71
SDF4-201ENST00000263741 KRT5P13647 590 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 RAPGEF1Q13905 1077 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 NFE2Q16621 373 aaPredicted RBP19.5■□□□□ 0.71
SDF4-201ENST00000263741 ZNF707Q96C28 371 aaPredicted RBP19.5■□□□□ 0.71
SDF4-201ENST00000263741 FAXDC2Q96IV6 333 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 TNIP3Q96KP6 325 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 HCFC1R1Q9NWW0 138 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 DNAJC12Q9UKB3 198 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 DENND4CQ5VZ89 1909 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 NOL4O94818 638 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 ATF6P18850 670 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 ADORA2BP29275 332 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 KCNQ1P51787 676 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 KLHDC7AQ5VTJ3 777 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 CCDC149Q6ZUS6 474 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 FUKQ8N0W3 1084 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 RBBP8NLQ8NC74 664 aaPredicted RBP19.5■□□□□ 0.71
SDF4-201ENST00000263741 SMRP1Q8NCR6 262 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 SPPL2BQ8TCT7 592 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 SLC2A14Q8TDB8 520 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 MED10Q9BTT4 135 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 S1PR5Q9H228 398 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 GANQ9H2C0 597 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 ACP6Q9NPH0 428 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.5■□□□□ 0.71
SDF4-201ENST00000263741 IFNKQ9P0W0 207 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 THEGQ9P2T0 379 aa19.5■□□□□ 0.71
SDF4-201ENST00000263741 DOCK8Q8NF50 2099 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 GRXCR2A6NFK2 248 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 SSTR3P32745 418 aaPredicted RBP19.49■□□□□ 0.71
SDF4-201ENST00000263741 USP8P40818 1118 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 DDR2Q16832 855 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 GLIPR1L2Q4G1C9 344 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 PAQR9Q6ZVX9 377 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 SCN4BQ8IWT1 228 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 CRYBG2Q8N1P7 616 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 TMEM176AQ96HP8 235 aa19.49■□□□□ 0.71
SDF4-201ENST00000263741 HEXIM2Q96MH2 286 aaKnown RBP19.49■□□□□ 0.71
SDF4-201ENST00000263741 LRG1P02750 347 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 HAPLN1P10915 354 aaPredicted RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 UCHL3P15374 230 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 MFAP3P55082 362 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 YWHAEP62258 255 aaKnown RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 NTHL1P78549 312 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 FILIP1LQ4L180 1135 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 C4orf50Q6ZRC1 276 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 FAM35AQ86V20 835 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 GIPC2Q8TF65 315 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 SMG7Q92540 1137 aaKnown RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 NLRC4Q9NPP4 1024 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 KRT82Q9NSB4 513 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 CEP72Q9P209 647 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 COG5Q9UP83 839 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 USP15Q9Y4E8 981 aaPredicted RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 CD19P15391 556 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 UBASH3AP57075 661 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 POLR2FP61218 127 aaKnown RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 MAPRE1Q15691 268 aaKnown RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 ELMSAN1Q6PJG2 1045 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.48■□□□□ 0.71
SDF4-201ENST00000263741 HDAC7Q8WUI4 952 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 ERGIC2Q96RQ1 377 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 ZDHHC7Q9NXF8 308 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 DPP7Q9UHL4 492 aa19.48■□□□□ 0.71
SDF4-201ENST00000263741 C1RP00736 705 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 HOXB8P17481 243 aaPredicted RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 CFAP221Q4G0U5 840 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 PPP1R26Q5T8A7 1209 aaPredicted RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 C2orf15Q8WU43 125 aaKnown RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 CYFIP2Q96F07 1278 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 PRKD2Q9BZL6 878 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms