RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 B4GALT3O60512 393 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 TIMP1P01033 207 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 ERBB2P04626 1255 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 TYMPP19971 482 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 COMTP21964 271 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CXCR5P32302 372 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 SLC1A1P43005 524 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 BRCC3P46736 316 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 DNA2P51530 1060 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 SNX16P57768 344 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PSMC1P62191 440 aaKnown RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 BST2Q10589 180 aaKnown RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PTPROQ16827 1216 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 HNRNPABQ99729 332 aaKnown RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 LPIN3Q9BQK8 851 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 SYT15Q9BQS2 421 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CTAGE15A4D2H0 777 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SPOPO43791 374 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 TADA3O75528 432 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 CTAGE8P0CG41 777 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 ACAT1P24752 427 aaKnown RBP13.74□□□□□ -0.21
VAMP7-201ENST00000262640 ADORA2BP29275 332 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 OR1G1P47890 313 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 CTAGE6Q86UF2 777 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 XYLT1Q86Y38 959 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 CTAGE4Q8IX94 777 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 UBL4BQ8N7F7 174 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 LRRN4CLQ8ND94 238 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 HASPINQ8TF76 798 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SLC35F5Q8WV83 523 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 RPGRIP1Q96KN7 1286 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SELENOOQ9BVL4 669 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SCN5AQ14524 2016 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 TMEM191CA6NGB0 347 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 I3L4J1 428 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 DDX3YO15523 660 aaKnown RBP13.74□□□□□ -0.21
VAMP7-201ENST00000262640 PROSCO94903 275 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 PDE4CQ08493 712 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 DCUN1D2Q6PH85 259 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SLC4A5Q9BY07 1137 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 IP6K2Q9UHH9 426 aa13.74□□□□□ -0.21
VAMP7-201ENST00000262640 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 ATP2C2O75185 946 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 ITGB1P05556 798 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 MAN1A1P33908 653 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 PAFAH1B1P43034 410 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 GATMP50440 423 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TUBB4BP68371 445 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 MDH1BQ5I0G3 518 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
VAMP7-201ENST00000262640 CD101Q93033 1021 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 MCEEQ96PE7 176 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 ACBD6Q9BR61 282 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 NRDE2Q9H7Z3 1164 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 DNAJB4Q9UDY4 337 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TET1Q8NFU7 2136 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 ABHD14A-ACY1A0A1B0GW23 586 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 CCDC66A2RUB6 948 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TBKBP1A7MCY6 615 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 GOLGA8SH3BPF8 625 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 CTNNA2P26232 953 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 SLC8A3P57103 927 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 CFAP221Q4G0U5 840 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 KIAA0319Q5VV43 1072 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 PMF1Q6P1K2 205 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 FUKQ8N0W3 1084 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 THEM5Q8N1Q8 247 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
VAMP7-201ENST00000262640 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
VAMP7-201ENST00000262640 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TMEM175Q9BSA9 504 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 CRTAC1Q9NQ79 661 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 TTC3P53804 2025 aa13.73□□□□□ -0.21
VAMP7-201ENST00000262640 E5RJQ4 531 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 F8W810 466 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 GJB6O95452 261 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 KRT3P12035 628 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 RAG1P15918 1043 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 RPL7AP62424 266 aaKnown RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 PLCB3Q01970 1234 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms