RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RSAD2Q8WXG1 361 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 NSL1Q96IY1 281 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 HAPLN2Q9GZV7 340 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 SAR1AQ9NR31 198 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 LNPEPQ9UIQ6 1025 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
TRAM1-201ENST00000262213 CST8O60676 142 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 ESRRAP11474 423 aaPredicted RBP18.32■□□□□ 0.52
TRAM1-201ENST00000262213 CDKN2BP42772 138 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 STMN2Q93045 179 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 PDCD2LQ9BRP1 358 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 NTPCRQ9BSD7 190 aaKnown RBP18.32■□□□□ 0.52
TRAM1-201ENST00000262213 DRG1Q9Y295 367 aaKnown RBP18.32■□□□□ 0.52
TRAM1-201ENST00000262213 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 LRRIQ4A6NIV6 560 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 MMP8P22894 467 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 DLGAP5Q15398 846 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 ZNF772Q68DY9 489 aaPredicted RBP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 SCARA5Q6ZMJ2 495 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 PPIL6Q8IXY8 311 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 ZNF276Q8N554 614 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 BANPQ8N9N5 519 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 VCPIP1Q96JH7 1222 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 TMEM63AO94886 807 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 SFNP31947 248 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 RPL22P35268 128 aaKnown RBP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 FKBP1AP62942 108 aaKnown RBP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 CCDC142Q17RM4 750 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 ADGRD1Q6QNK2 874 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 DCAKDQ8WVC6 231 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 FAM151AQ8WW52 585 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 PTCD3Q96EY7 689 aaKnown RBP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 SERAC1Q96JX3 654 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 TLE6Q9H808 572 aa18.31■□□□□ 0.52
TRAM1-201ENST00000262213 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 XPO7Q9UIA9 1087 aaKnown RBP18.31■□□□□ 0.52
TRAM1-201ENST00000262213 FAM237BA0A1B0GVD1 139 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 TBX10O75333 385 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 LMNAP02545 664 aaKnown RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 ITGAVP06756 1048 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 SP100P23497 879 aaPredicted RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 CALRP27797 417 aaKnown RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 THOC5Q13769 683 aaKnown RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 CCDC62Q6P9F0 684 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 DRICH1Q6PGQ1 229 aaPredicted RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 ALYREFQ86V81 257 aaKnown RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 UNC45BQ8IWX7 931 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 NLGN1Q8N2Q7 840 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 MSTO1Q9BUK6 570 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 PCSK1NQ9UHG2 260 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 IKBKGQ9Y6K9 419 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 WASF2Q9Y6W5 498 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 MYL2P10916 166 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 PTK7Q13308 1070 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 NCOA4Q13772 614 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 IGDCC3Q8IVU1 814 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 FAM71DQ8N9W8 422 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 ACSS3Q9H6R3 686 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 PXMP2Q9NR77 195 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 TAS2R1Q9NYW7 299 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 TJP2Q9UDY2 1190 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 ZNRF3Q9ULT6 936 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 FARP1Q9Y4F1 1045 aaPredicted RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 PSMG1O95456 288 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 CD48P09326 243 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 PYGBP11216 843 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 MCCD1P59942 119 aaPredicted RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 YWHAGP61981 247 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 PRKCEQ02156 737 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 MCL1Q07820 350 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 FAAP100Q0VG06 881 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 BIRC2Q13490 618 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 LRRC74BQ6ZQY2 392 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
TRAM1-201ENST00000262213 KCNK13Q9HB14 408 aa18.3■□□□□ 0.52
TRAM1-201ENST00000262213 CCDC195A0A1B0GUA6 201 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 FAM155BO75949 473 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 CST3P01034 146 aaPredicted RBP18.29■□□□□ 0.52
TRAM1-201ENST00000262213 PSMA2P25787 234 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 KLHL38Q2WGJ6 581 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 NBPF20Q3BBV1 942 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 SLC30A9Q6PML9 568 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 CCDC60Q8IWA6 550 aaPredicted RBP18.29■□□□□ 0.52
TRAM1-201ENST00000262213 MZB1Q8WU39 189 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 SNCAIPQ9Y6H5 919 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.29■□□□□ 0.52
TRAM1-201ENST00000262213 FCHO1O14526 889 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 WEE2P0C1S8 567 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 KITP10721 976 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 CDK16Q00536 496 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 BAATQ14032 418 aaPredicted RBP18.29■□□□□ 0.52
TRAM1-201ENST00000262213 PHC3Q8NDX5 983 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 SLC35B2Q8TB61 432 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 MECRQ9BV79 373 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 CYP26B1Q9NR63 512 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms