RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 DENND1BQ6P3S1 775 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 SCARA5Q6ZMJ2 495 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 TMEM35BQ8NCS4 154 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 EXD1Q8NHP7 514 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.67■□□□□ 0.58
SSB-201ENST00000260956 VWCEQ96DN2 955 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 PLVAPQ9BX97 442 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 ASB7Q9H672 318 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 IP6K2Q9UHH9 426 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 STAU1O95793 577 aaKnown RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 PAEPP09466 180 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 RAP1GAPP47736 663 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 GRIK4Q16099 956 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 TRIM71Q2Q1W2 868 aaKnown RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 PTPN20Q4JDL3 420 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 SGO2Q562F6 1265 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 AGBL2Q5U5Z8 902 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 RUFY4Q6ZNE9 571 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 SERINC5Q86VE9 423 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 KIAA0319LQ8IZA0 1049 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 C3orf20Q8ND61 904 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 MAIP1Q8WWC4 291 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 C1orf54Q8WWF1 131 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 ATG4AQ8WYN0 398 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 BADQ92934 168 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 RNF25Q96BH1 459 aaPredicted RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 TWNKQ96RR1 684 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 PABPC3Q9H361 631 aaKnown RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 SMYD3Q9H7B4 428 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 AAASQ9NRG9 546 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 NRCAMQ92823 1304 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 C17orf102A2RUQ5 167 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 EIF3HO15372 352 aaKnown RBP eCLIP18.66■□□□□ 0.58
SSB-201ENST00000260956 ECEL1O95672 775 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 RALAP11233 206 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 PTPN7P35236 360 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 MAGEA10P43363 369 aaPredicted RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 PLTPP55058 493 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 YWHAEP62258 255 aaKnown RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 FOXR1Q6PIV2 292 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 SYDE1Q6ZW31 735 aaPredicted RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 SLC4A11Q8NBS3 891 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 UBLCP1Q8WVY7 318 aaPredicted RBP18.66■□□□□ 0.58
SSB-201ENST00000260956 TLCD1Q96CP7 247 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 CPB2Q96IY4 423 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 WHRNQ9P202 907 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 PARP2Q9UGN5 583 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 HMGXB4Q9UGU5 601 aa18.66■□□□□ 0.58
SSB-201ENST00000260956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.66■□□□□ 0.58
SSB-201ENST00000260956 TRIP11Q15643 1979 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 A0A1B0GUA9 196 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 MBLAC1A4D2B0 266 aaPredicted RBP18.65■□□□□ 0.58
SSB-201ENST00000260956 CILPO75339 1184 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 TIMP1P01033 207 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 NR1D1P20393 614 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 CCL23P55773 120 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 CCDC105Q8IYK2 499 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 CAPS2Q9BXY5 557 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 OSBPL7Q9BZF2 842 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 ELOVL4Q9GZR5 314 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 ADAMTS10Q9H324 1103 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 SLC12A6Q9UHW9 1150 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 LCMT1Q9UIC8 334 aa18.65■□□□□ 0.58
SSB-201ENST00000260956 RAG1P15918 1043 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 ATICP31939 592 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 KRT17Q04695 432 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 INCA1Q0VD86 236 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 GPNMBQ14956 572 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 KYAT1Q16773 422 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 ZNF394Q53GI3 561 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 ZNF667Q5HYK9 610 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 TRAF7Q6Q0C0 670 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 ZNF410Q86VK4 478 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 PKNOX2Q96KN3 472 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 GDF15Q99988 308 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 TMEM109Q9BVC6 243 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 OSBPL8Q9BZF1 889 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 CYP3A43Q9HB55 503 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 TJP2Q9UDY2 1190 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 AKT3Q9Y243 479 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 C2CD2Q9Y426 696 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 KAT6AQ92794 2004 aa18.64■□□□□ 0.57
SSB-201ENST00000260956 ITGB3P05106 788 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 MYZAPP0CAP1 466 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 PMS2P54278 862 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 CDH8P55286 799 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 EIF3BP55884 814 aaKnown RBP18.63■□□□□ 0.57
SSB-201ENST00000260956 TAP1Q03518 808 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 LLGL1Q15334 1064 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 DNAJC24Q6P3W2 148 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 LEKR1Q6ZMV7 388 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 SCLYQ96I15 445 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 MCEEQ96PE7 176 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 SLITRK1Q96PX8 696 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 PRO3102Q9H379 93 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 NOD1Q9Y239 953 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms