RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TNIP3Q96KP6 325 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 FEZ2Q9UHY8 353 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 TTC7AQ9ULT0 858 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 Q9Y3F1 56 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 PLXNB2O15031 1838 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 RNF40O75150 1001 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 HMGCRP04035 888 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 ATF2P15336 505 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 GJA9P57773 515 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 KRT17Q04695 432 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 C3orf20Q8ND61 904 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 JOSD2Q8TAC2 188 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 SLC2A14Q8TDB8 520 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 DPEP3Q9H4B8 488 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 ASNSD1Q9NWL6 643 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 WDR35Q9P2L0 1181 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 PADI3Q9ULW8 664 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 TJP3O95049 919 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 PNPLA4P41247 253 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 ATN1P54259 1190 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 TAP1Q03518 808 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 CAPN12Q6ZSI9 719 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 HMX1Q9NP08 348 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 SRRDQ9UH36 339 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 HPCAL4Q9UM19 191 aa9.17□□□□□ -0.94
CALCOCO2-201ENST00000258947 ERBB2P04626 1255 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 COILP38432 576 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 CDH6P55285 790 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PCBP1Q15365 356 aaKnown RBP eCLIP9.16□□□□□ -0.948e-6■■■■□ 23.1
CALCOCO2-201ENST00000258947 CNGA2Q16280 664 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 KRT71Q3SY84 523 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 WSCD1Q658N2 575 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PLEKHA7Q6IQ23 1121 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PRELID2Q8N945 189 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 CCDC89Q8N998 374 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 GRK7Q8WTQ7 553 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 USP6NLQ92738 828 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 ERP44Q9BS26 406 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 CHST7Q9NS84 486 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 SLC38A7Q9NVC3 462 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PRG3Q9Y2Y8 225 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 KBTBD13C9JR72 458 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PODXLO00592 558 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 KIF3CO14782 793 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 MAP3K6O95382 1288 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 KRT7P08729 469 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 HOXD8P13378 290 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 TCF4P15884 667 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 LMO2P25791 158 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 ARPP19P56211 112 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 DHX34Q14147 1143 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 ZNF618Q5T7W0 954 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 MFSD7Q6UXD7 560 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 RASGEF1CQ8N431 466 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 OR2W6PQ8NHA6 318 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 OLIG1Q8TAK6 271 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 RSAD2Q8WXG1 361 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 RNF34Q969K3 372 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 B3GNT5Q9BYG0 378 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 FAM204AQ9H8W3 233 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 H3BQF6 201 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PSTPIP1O43586 416 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 KRT14P02533 472 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 ZNF132P52740 706 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 HADHBP55084 474 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 STILQ15468 1287 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 C15orf59Q2T9L4 293 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 METTL23Q86XA0 190 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 FAM76AQ8TAV0 307 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 RXFP2Q8WXD0 754 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 BCO2Q9BYV7 579 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 TRPV6Q9H1D0 765 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 GPATCH2LQ9NWQ4 482 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 HEY1Q9Y5J3 304 aa9.16□□□□□ -0.94
CALCOCO2-201ENST00000258947 ARID2Q68CP9 1835 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 TMEM191CA6NGB0 347 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 TULP2O00295 520 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 INHAP05111 366 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 GPD1P21695 349 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 PEX5P50542 639 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 MDH1BQ5I0G3 518 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 CEP57Q86XR8 500 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 LRRC52Q8N7C0 313 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 SH3TC2Q8TF17 1288 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 RSAD1Q9HA92 442 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 MED4Q9NPJ6 270 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 DDX43Q9NXZ2 648 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 DDX20Q9UHI6 824 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 KIAA1257Q9ULG3 409 aa9.15□□□□□ -0.94
CALCOCO2-201ENST00000258947 WDR81Q562E7 1941 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms