RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 GPSM2P81274 684 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 OTUD4Q01804 1114 aaKnown RBP12.89□□□□□ -0.35
USP30-201ENST00000257548 GAD2Q05329 585 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 ART3Q13508 389 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 C16orf72Q14CZ0 275 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 CEP55Q53EZ4 464 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 EFHC1Q5JVL4 640 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 IL31Q6EBC2 164 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 SV2AQ7L0J3 742 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 DRAXINQ8NBI3 349 aaPredicted RBP12.89□□□□□ -0.35
USP30-201ENST00000257548 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 SEC14L1Q92503 715 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 ZC3H7BQ9UGR2 993 aaKnown RBP12.89□□□□□ -0.35
USP30-201ENST00000257548 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 PCDHA2Q9Y5H9 948 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
USP30-201ENST00000257548 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 DNALI1O14645 258 aaPredicted RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 FSCN2O14926 492 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 NOL3O60936 208 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 AVILO75366 819 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 ZNF189O75820 626 aaPredicted RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 KCNA4P22459 653 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 PMLP29590 882 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SLC1A1P43005 524 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 RPL7AP62424 266 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 ORC1Q13415 861 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 GEN1Q17RS7 908 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 TRMT5Q32P41 509 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 ARL10Q8N8L6 244 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 TMA16Q96EY4 203 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 HSPA4LO95757 839 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 NDUFB10O96000 172 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 T-ENOLP0DO92 83 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 GYS1P13807 737 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 GNAZP19086 355 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 BST1Q10588 318 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 NCOA4Q13772 614 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 C11orf91Q3C1V1 193 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 EMC1Q8N766 993 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SPATA18Q8TC71 538 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SREK1Q8WXA9 508 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 KREMEN1Q96MU8 473 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 CCT7Q99832 543 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 TRPV6Q9H1D0 765 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 ARHGAP10A1A4S6 786 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 KRT38O76015 456 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 TMCC1O94876 653 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 ZBED1O96006 694 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SERPINB5P36952 375 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 STAT2P52630 851 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 COPAP53621 1224 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 PPIDQ08752 370 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 MTERF2Q49AM1 385 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 TRIM42Q8IWZ5 723 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 PTPRN2Q92932 1015 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 EME1Q96AY2 570 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SPATA16Q9BXB7 569 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 OLFML3Q9NRN5 406 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 ATXN10Q9UBB4 475 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
USP30-201ENST00000257548 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 DNAJC16Q9Y2G8 782 aa12.88□□□□□ -0.35
USP30-201ENST00000257548 ADGRA3Q8IWK6 1321 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 MYOCOSA0A1B0GUC4 107 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 RFX1P22670 979 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 EEF1B2P24534 225 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 PEX2P28328 305 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 CENPCQ03188 943 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 CDC16Q13042 620 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 OASLQ15646 514 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 NRF1Q16656 503 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 PGBD4Q96DM1 585 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 SCYL1Q96KG9 808 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 ACSS2Q9NR19 701 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 SCINQ9Y6U3 715 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 ZMYM2Q9UBW7 1377 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms