RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SPAG5Q96R06 1193 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 B3GNT5Q9BYG0 378 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 RHOBTB2Q9BYZ6 727 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 NUCKS1Q9H1E3 243 aaKnown RBP14.99□□□□□ -0.01
VPS25-201ENST00000253794 CRISPLD1Q9H336 500 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 CSNK1G1Q9HCP0 422 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 DZANK1Q9NVP4 752 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 REV3LO60673 3130 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 ATP8B3O60423 1300 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 PLXNA3P51805 1871 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 PER2O15055 1255 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 CYP26A1O43174 497 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 SEC24AO95486 1093 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 GLP2RO95838 553 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 HAPLN1P10915 354 aaPredicted RBP14.98□□□□□ -0.01
VPS25-201ENST00000253794 FOSL2P15408 326 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 EPCAMP16422 314 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 IGFBP4P22692 258 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ARPP19P56211 112 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ZBED6P86452 979 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 PTK2Q05397 1052 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ADCY1Q08828 1119 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 CNGA2Q16280 664 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 PKDCCQ504Y2 493 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ELMSAN1Q6PJG2 1045 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 LCLAT1Q6UWP7 414 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 CCDC149Q6ZUS6 474 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.98□□□□□ -0.01
VPS25-201ENST00000253794 RBM23Q86U06 439 aaKnown RBP14.98□□□□□ -0.01
VPS25-201ENST00000253794 FAM35AQ86V20 835 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ZNF677Q86XU0 584 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 SPATA2LQ8IUW3 424 aaPredicted RBP14.98□□□□□ -0.01
VPS25-201ENST00000253794 GLYCTKQ8IVS8 523 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ATAD1Q8NBU5 361 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 CMASQ8NFW8 434 aaPredicted RBP14.98□□□□□ -0.01
VPS25-201ENST00000253794 TFAP2BQ92481 460 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 CYFIP2Q96F07 1278 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 HEXIM2Q96MH2 286 aaKnown RBP14.98□□□□□ -0.01
VPS25-201ENST00000253794 LPIN3Q9BQK8 851 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ZSWIM1Q9BR11 485 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 ZDHHC7Q9NXF8 308 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 AIPL1Q9NZN9 384 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 PCDHGC3Q9UN70 934 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 PTPRDP23468 1912 aa14.98□□□□□ -0.01
VPS25-201ENST00000253794 SPTBN5Q9NRC6 3674 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 ZMYND10O75800 440 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 ADCY5O95622 1261 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 HNRNPA1P09651 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS25-201ENST00000253794 PNMA6AP0CW24 399 aaPredicted RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 CCDC130P13994 396 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 GNA15P30679 374 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 HNRNPH3P31942 346 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 GTF2F1P35269 517 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS25-201ENST00000253794 PRKCIP41743 596 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 TUFMP49411 452 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 MRE11P49959 708 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 DUSP4Q13115 394 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 PPP1R26Q5T8A7 1209 aaPredicted RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 ZNF397Q8NF99 534 aaPredicted RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 ZNF606Q8WXB4 792 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 SMARCD1Q96GM5 515 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 C8orf48Q96LL4 319 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 DNAJC7Q99615 494 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 ZNF518BQ9C0D4 1074 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 PNPLA8Q9NP80 782 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 MAN1C1Q9NR34 630 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 NOCTQ9UK39 431 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS25-201ENST00000253794 LUC7L2Q9Y383 392 aaKnown RBP14.97□□□□□ -0.01
VPS25-201ENST00000253794 INSL5Q9Y5Q6 135 aa14.97□□□□□ -0.01
VPS25-201ENST00000253794 LRRC53A6NM62 1247 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 C8AP07357 584 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 CCDC172P0C7W6 258 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 SRGAP2BP0DMP2 458 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 CD19P15391 556 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 CYP11B1P15538 503 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 FERP16591 822 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 HOXB8P17481 243 aaPredicted RBP14.96□□□□□ -0.01
VPS25-201ENST00000253794 CASP14P31944 242 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 ELF1P32519 619 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 CYP27A1Q02318 531 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 PLD1Q13393 1074 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 GSE1Q14687 1217 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 LIN9Q5TKA1 542 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 CYP26C1Q6V0L0 522 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 IRF2BP2Q7Z5L9 587 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 SLC47A2Q86VL8 602 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 TTC9BQ8N6N2 239 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 ANKRD52Q8NB46 1076 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 EPS8L1Q8TE68 723 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 SPATA17Q96L03 361 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 SYT11Q9BT88 431 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 DUSP16Q9BY84 665 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 UBXN6Q9BZV1 441 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 CYP4F11Q9HBI6 524 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 FAM49BQ9NUQ9 324 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms