RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 PPM1LQ5SGD2 360 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 CYP26C1Q6V0L0 522 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 SPATA31D4Q6ZUB0 917 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 SLC7A14Q8TBB6 771 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 HNRNPABQ99729 332 aaKnown RBP24.24■■□□□ 1.47
APOE-201ENST00000252486 B3GNT5Q9BYG0 378 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 TRIM5Q9C035 493 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 AJAP1Q9UKB5 411 aaPredicted RBP24.24■■□□□ 1.47
APOE-201ENST00000252486 ITIH6Q6UXX5 1313 aa24.24■■□□□ 1.47
APOE-201ENST00000252486 LINC01565O15544 149 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 SEC24AO95486 1093 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 VNN2O95498 520 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 HAPLN1P10915 354 aaPredicted RBP24.23■■□□□ 1.47
APOE-201ENST00000252486 USP8P40818 1118 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 RPL10AP62906 217 aaKnown RBP24.23■■□□□ 1.47
APOE-201ENST00000252486 MGAT5BQ3V5L5 792 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 SGO2Q562F6 1265 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 ARHGAP17Q68EM7 881 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 ANKRD54Q6NXT1 300 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 FAM71AQ8IYT1 594 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 CMASQ8NFW8 434 aaPredicted RBP24.23■■□□□ 1.47
APOE-201ENST00000252486 PPM1EQ8WY54 764 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 CYFIP2Q96F07 1278 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 CEP295NLQ96MC4 621 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 MED10Q9BTT4 135 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 NLRC4Q9NPP4 1024 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 MYO6Q9UM54 1294 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 INSL5Q9Y5Q6 135 aa24.23■■□□□ 1.47
APOE-201ENST00000252486 F8VZ95 297 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 FOXN3O00409 490 aaPredicted RBP24.22■■□□□ 1.47
APOE-201ENST00000252486 EPHB6O15197 1021 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 PAPLNO95428 1278 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 POU2F2P09086 479 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 CD19P15391 556 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 STAT1P42224 750 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 ALDH1A3P47895 512 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 PTK2Q05397 1052 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 EP400NLQ6ZTU2 488 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 FUKQ8N0W3 1084 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 C12orf29Q8N999 325 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 SMARCD1Q96GM5 515 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 RHOBTB2Q9BYZ6 727 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 FAM49BQ9NUQ9 324 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 COG5Q9UP83 839 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 YIPF1Q9Y548 306 aa24.22■■□□□ 1.47
APOE-201ENST00000252486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.22■■□□□ 1.47
APOE-201ENST00000252486 RNF225M0QZC1 329 aaPredicted RBP24.21■■□□□ 1.47
APOE-201ENST00000252486 XYLBO75191 536 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 LRG1P02750 347 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 BDNFP23560 247 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 JAM2P57087 298 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 CCDC142Q17RM4 750 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 FAM35AQ86V20 835 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 SLC2A14Q8TDB8 520 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 SEPT5Q99719 369 aaPredicted RBP24.21■■□□□ 1.47
APOE-201ENST00000252486 GPR88Q9GZN0 384 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 UBE2ZQ9H832 354 aaPredicted RBP24.21■■□□□ 1.47
APOE-201ENST00000252486 SLC27A5Q9Y2P5 690 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 CDH23Q9H251 3354 aa24.21■■□□□ 1.47
APOE-201ENST00000252486 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.2■■□□□ 1.46
APOE-201ENST00000252486 TRIM66O15016 1216 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 MED7O43513 233 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 CCDC130P13994 396 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 CYP2F1P24903 491 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 SOX5P35711 763 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 EPHB3P54753 998 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 RBM10P98175 930 aaKnown RBP24.2■■□□□ 1.46
APOE-201ENST00000252486 TRIM14Q14142 442 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 SPECC1LQ69YQ0 1117 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 ELMOD1Q8N336 334 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 HLA-CQ95604 372 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 LPIN3Q9BQK8 851 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 PRKD2Q9BZL6 878 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 CRISPLD1Q9H336 500 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 CLEC1BQ9P126 229 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 ASB3Q9Y575 518 aa24.2■■□□□ 1.46
APOE-201ENST00000252486 A0A1W2PQJ5 194 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 CLDN5O00501 218 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 CYP26A1O43174 497 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 TBX10O75333 385 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 CCDC172P0C7W6 258 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 FAM200BP0CF97 657 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 GNA15P30679 374 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 LTBRP36941 435 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 SLC8A3P57103 927 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 ITIH3Q06033 890 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 TWF1Q12792 350 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 VEPH1Q14D04 833 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 CNGA2Q16280 664 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 PPP1R26Q5T8A7 1209 aaPredicted RBP24.19■■□□□ 1.46
APOE-201ENST00000252486 PAQR9Q6ZVX9 377 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 TTC9BQ8N6N2 239 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 ZNF397Q8NF99 534 aaPredicted RBP24.19■■□□□ 1.46
APOE-201ENST00000252486 MSLNLQ96KJ4 702 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 ZNF518BQ9C0D4 1074 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 NUCKS1Q9H1E3 243 aaKnown RBP24.19■■□□□ 1.46
APOE-201ENST00000252486 DMAP1Q9NPF5 467 aaPredicted RBP24.19■■□□□ 1.46
APOE-201ENST00000252486 HESX1Q9UBX0 185 aa24.19■■□□□ 1.46
APOE-201ENST00000252486 SZT2Q5T011 3432 aa24.18■■□□□ 1.46
APOE-201ENST00000252486 PTPRDP23468 1912 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms