RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PCED1BQ96HM7 432 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 TNIP3Q96KP6 325 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 BCO2Q9BYV7 579 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 FAM124BQ9H5Z6 455 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ZNF334Q9HCZ1 680 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 UXTQ9UBK9 157 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 CTNND2Q9UQB3 1225 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 HCN4Q9Y3Q4 1203 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ATP8B3O60423 1300 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 A0A1W2PRU2 124 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 BIN1O00499 593 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 TRIM66O15016 1216 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 NARSO43776 548 aaKnown RBP13.62□□□□□ -0.23
VPREB3-201ENST00000248948 TRIM21P19474 475 aaKnown RBP13.62□□□□□ -0.23
VPREB3-201ENST00000248948 CYP2F1P24903 491 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 GABRR2P28476 465 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 INCA1Q0VD86 236 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 TEAD2Q15562 447 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 TAF12Q16514 161 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 ARHGAP15Q53QZ3 475 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 ISM2Q6H9L7 571 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 KLHL10Q6JEL2 608 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 GAREM2Q75VX8 874 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 FRMD5Q7Z6J6 570 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 UNC93AQ86WB7 457 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 SUGP1Q8IWZ8 645 aaKnown RBP13.62□□□□□ -0.23
VPREB3-201ENST00000248948 FBXL6Q8N531 539 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 FBXL13Q8NEE6 735 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 E2F7Q96AV8 911 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 MCRS1Q96EZ8 462 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 EEF2KMTQ96G04 330 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 SPATA17Q96L03 361 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 MYRFLQ96LU7 910 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 CYP3A43Q9HB55 503 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 IL21Q9HBE4 155 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
VPREB3-201ENST00000248948 WNT16Q9UBV4 365 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 MUC6Q6W4X9 2439 aa13.62□□□□□ -0.23
VPREB3-201ENST00000248948 SOBPA7XYQ1 873 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 NRG2O14511 850 aaPredicted RBP13.61□□□□□ -0.23
VPREB3-201ENST00000248948 ATP2C2O75185 946 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 GNA14O95837 355 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 PDGFRBP09619 1106 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 HMGA1P17096 107 aaKnown RBP13.61□□□□□ -0.23
VPREB3-201ENST00000248948 PTPN1P18031 435 aaKnown RBP13.61□□□□□ -0.23
VPREB3-201ENST00000248948 DDX6P26196 483 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPREB3-201ENST00000248948 WEE1P30291 646 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 PFKPQ01813 784 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 FAM78AQ5JUQ0 283 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 TCERG1LQ5VWI1 586 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 FILIP1Q7Z7B0 1213 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 TTC39CQ8N584 583 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 ZSCAN18Q8TBC5 510 aaPredicted RBP13.61□□□□□ -0.23
VPREB3-201ENST00000248948 DEPDC1BQ8WUY9 529 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 PBXIP1Q96AQ6 731 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 DUSP9Q99956 384 aaKnown RBP13.61□□□□□ -0.23
VPREB3-201ENST00000248948 KXD1Q9BQD3 176 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 DNAI2Q9GZS0 605 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 SDCBP2Q9H190 292 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 DPEP3Q9H4B8 488 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 MMRN2Q9H8L6 949 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 ZFP14Q9HCL3 533 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 FBXL21Q9UKT6 434 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 COQ4Q9Y3A0 265 aa13.61□□□□□ -0.23
VPREB3-201ENST00000248948 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 PMM2O15305 246 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 GJA1P17302 382 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 ANXA13P27216 316 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 GPR15P49685 360 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
VPREB3-201ENST00000248948 NLRP12P59046 1061 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 CAMK4Q16566 473 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 DDR2Q16832 855 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 CBWD6Q4V339 395 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 CBWD3Q5JTY5 395 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 CBWD5Q5RIA9 395 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 SPOPLQ6IQ16 392 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 POTEHQ6S545 545 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 FAM35AQ86V20 835 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 GIPC2Q8TF65 315 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 DNASE1L2Q92874 299 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 C8orf48Q96LL4 319 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 KCNH6Q9H252 994 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms