RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 CYLDQ9NQC7 956 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 HOMER2Q9NSB8 354 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 SAE1Q9UBE0 346 aaPredicted RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 TAGLN3Q9UI15 199 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 DNPEPQ9ULA0 475 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 IVNS1ABPQ9Y6Y0 642 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 PIK3CDO00329 1044 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 ANXA13P27216 316 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 EIF2B2P49770 351 aaKnown RBP19.14■□□□□ 0.65
PTPN12-201ENST00000248594 KPNA1P52294 538 aaPredicted RBP19.14■□□□□ 0.65
PTPN12-201ENST00000248594 CAV1Q03135 178 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 KCTD1Q719H9 257 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 TMC7Q7Z402 723 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 OLIG1Q8TAK6 271 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 ARHGEF4Q9NR80 690 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 UBAP1Q9NZ09 502 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 FSCN2O14926 492 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 TGFB1I1O43294 461 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 EDIL3O43854 480 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 LDHAP00338 332 aaKnown RBP19.14■□□□□ 0.65
PTPN12-201ENST00000248594 ZNF76P36508 570 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 YWHAGP61981 247 aaKnown RBP eCLIP19.14■□□□□ 0.65
PTPN12-201ENST00000248594 CHI3L2Q15782 390 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 TMEM214Q6NUQ4 689 aaKnown RBP19.14■□□□□ 0.65
PTPN12-201ENST00000248594 C17orf50Q8WW18 174 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 CCT7Q99832 543 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 ANKRD2Q9GZV1 360 aa19.14■□□□□ 0.65
PTPN12-201ENST00000248594 DLDP09622 509 aaKnown RBP19.13■□□□□ 0.65
PTPN12-201ENST00000248594 CETN1Q12798 172 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 ZNF568Q3ZCX4 644 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 C12orf60Q5U649 245 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 CENPUQ71F23 418 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 LPCAT2Q7L5N7 544 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 CPNE9Q8IYJ1 553 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 AGR3Q8TD06 166 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 PPP1R36Q96LQ0 422 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 TRNAU1APQ9NX07 287 aaKnown RBP19.13■□□□□ 0.65
PTPN12-201ENST00000248594 IKQ13123 557 aaPredicted RBP19.13■□□□□ 0.65
PTPN12-201ENST00000248594 RASA3Q14644 834 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 C14orf80Q86SX3 495 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 DEFB107AQ8IZN7 70 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 SLC35B4Q969S0 331 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 MMP19Q99542 508 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 TMEM121Q9BTD3 319 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 XPNPEP1Q9NQW7 623 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 RRN3Q9NYV6 651 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 CAMTA1Q9Y6Y1 1673 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 TAF1P21675 1872 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 ATP9BO43861 1147 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 FAM155BO75949 473 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 POLR2MP0CAP2 368 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 RXRBP28702 533 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 VCPP55072 806 aaKnown RBP19.13■□□□□ 0.65
PTPN12-201ENST00000248594 CCDC80Q76M96 950 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 FASTKD5Q7L8L6 764 aaKnown RBP19.13■□□□□ 0.65
PTPN12-201ENST00000248594 FAM178BQ8IXR5 827 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 SMYD1Q8NB12 490 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 FNDC8Q8TC99 324 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 NDUFA13Q9P0J0 144 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 TRIM17Q9Y577 477 aa19.13■□□□□ 0.65
PTPN12-201ENST00000248594 EMP3P54852 163 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 ARHGAP4P98171 946 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 ITGA7Q13683 1181 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 DNAL1Q4LDG9 190 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 ZFPM1Q8IX07 1006 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 SLC15A3Q8IY34 581 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 COL22A1Q8NFW1 1626 aaPredicted RBP19.12■□□□□ 0.65
PTPN12-201ENST00000248594 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 NOP56O00567 594 aaKnown RBP19.12■□□□□ 0.65
PTPN12-201ENST00000248594 STRNO43815 780 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 GSTT2P0CG29 244 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 GSTT2BP0CG30 244 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 SMIM18P0DKX4 95 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 FDFT1P37268 417 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 SIK1P57059 783 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 RINT1Q6NUQ1 792 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 ETNPPLQ8TBG4 499 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 SENP1Q9P0U3 644 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 MAD1L1Q9Y6D9 718 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 SCN11AQ9UI33 1791 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 F8W8V4 182 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 FKBP6O75344 327 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 TCN1P20061 433 aaPredicted RBP19.12■□□□□ 0.65
PTPN12-201ENST00000248594 BST1Q10588 318 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 NRF1Q16656 503 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 ODR4Q5SWX8 454 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 UGT2A3Q6UWM9 527 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 LRGUKQ96M69 825 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 PKD2L1Q9P0L9 805 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 AP4B1Q9Y6B7 739 aa19.12■□□□□ 0.65
PTPN12-201ENST00000248594 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 E2F8A0AVK6 867 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 HTR3EA5X5Y0 456 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 COPEO14579 308 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 MAGEC1O60732 1142 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 INHBAP08476 426 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 FGRP09769 529 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 ALDH1A3P47895 512 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 RAP1GDS1P52306 607 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms