RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 DDX56Q9NY93 547 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 SLC12A4Q9UP95 1085 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 CFAP69A5D8W1 941 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ITGB3P05106 788 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 KRT7P08729 469 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 GDF10P55107 478 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 YWHAEP62258 255 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 SLC1A5Q15758 541 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ANKRD20A3Q5VUR7 823 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 NPNTQ6UXI9 565 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 C15orf39Q6ZRI6 1047 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 PPP1R14CQ8TAE6 165 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 RAB3IPQ96QF0 476 aaPredicted RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 DHX33Q9H6R0 707 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 RTP1P59025 263 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 NR1H3Q13133 447 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 MORF4L2Q15014 288 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 TAF5Q15542 800 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 ATF7IP2Q5U623 682 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 C7orf31Q8N865 590 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 MTMR14Q8NCE2 650 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 ZFP69BQ9UJL9 534 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 USH1CQ9Y6N9 552 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 NRXN2Q9P2S2 1712 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 CCDC195A0A1B0GUA6 201 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 MGRN1O60291 552 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 EFNA5P52803 228 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 EEF1DP3Q658K8 133 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 PPP1R2P3Q6NXS1 205 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 RNF19AQ9NV58 838 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 CSADQ9Y600 493 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 MED7O43513 233 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 STBD1O95210 358 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 RFX8Q6ZV50 586 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 MCUR1Q96AQ8 359 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 SLC13A1Q9BZW2 595 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 RAB6BQ9NRW1 208 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 SMG5Q9UPR3 1016 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-201ENST00000247833 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 KLRC2P26717 231 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 PCK1P35558 622 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 MCL1Q07820 350 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 CATSPERGQ6ZRH7 1159 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 PPIL6Q8IXY8 311 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 MAML1Q92585 1016 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 COPS5Q92905 334 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 CCDC134Q9H6E4 229 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 PCDH9Q9HC56 1237 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 COL2A1P02458 1487 aaPredicted RBP13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 LPXNO60711 386 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 PDGFRAP16234 1089 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 RFC5P40937 340 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 HSDL1Q3SXM5 330 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 UNC45BQ8IWX7 931 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 TCP10LQ8TDR4 215 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 MIS12Q9H081 205 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 NFASCO94856 1347 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
RAB3IP-201ENST00000247833 DCTN3O75935 186 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 KITP10721 976 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 RPL22P35268 128 aaKnown RBP13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 ARL2P36404 184 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 MXRA7P84157 204 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 FBXO16Q8IX29 292 aaPredicted RBP13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 RIBC1Q8N443 379 aaPredicted RBP13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 FAM111AQ96PZ2 611 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 APOL6Q9BWW8 343 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 APRTP07741 180 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 CDKN2BP42772 138 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 ROR1Q01973 937 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 ZNF252P-AS1Q0IIN9 211 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 RCN2Q14257 317 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 MTDHQ86UE4 582 aaKnown RBP13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 LONP2Q86WA8 852 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms